Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4400 |
Symbol | |
ID | 1172000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4592515 |
End bp | 4593471 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637346123 |
Product | proline iminopeptidase, putative |
Protein accession | NP_719923 |
Protein GI | 24375880 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTACTG ATGTCTATCA GGTCGCCCCT TTTATCCGCC GTGATTGGCT GATGATGGGC AGTGGGCAGC AGTTGCATCT TGCCCAATAT GGTAATCCGC AGGGGATTCC GTTGTTATAT CTACATGGCG GCCCAGGGGC GGGTGCCAGT GTGAGTGAGC TAAGTTTATT TAACCCCGAG CATTATTGGA TTTTACTGCT GGATCAACGT GGTGCGGGGC AATCACTGCC TTCTGGCGAG TTAGAACACA ATCATTTGAA TGGACTTATT TGCGATATTG AGGCAATTCG TATCCGTTTA GGGATAGAGC GTTGGTGCTT AGCGGGTGGT TCATTTGGCG CCACCTTAGC TTTAATTTAC AGTGGATTAT TTCCCAATCG GGTGATCGCC CAAGTGTTAT GGGCACTGTT TATTCCATCA AAAGAGGGGA TTGAATGGCT CTATACGCCA TCGGGCGCGG CGCAGTTATA TCCGCAGGCT CACCGTGAAT TTGCTGCTCC TTCTATTGGA TTGGCGGATT TATTTACGCA CTATCAGCTA GGATTTAACG CCCAAGATGA AGCAACTCGC CATGAGTTTG CCCGCCGTTG GATCCAATGG GAATTAACCT TGGCGGGGGT GCCAATAGCG CTGCCAAGAA GGCTCTCGGC CCAGCAATTG GCCTTAGCTC AGATAGAGCT ACACTATGCG CAAAATGGTT ACTTCAATAT GTTCAGTGTA TTACAGCGGG TGACATCTCA GGTCACAGCG CGTACCCTGT TATTACAAGG TACGCAGGAT GCCGTCTGTC CGGCACGTTT ATTAGCCACC TTTTTGACAA AGGTCGGCAA CCATAGGATA GAAATCCACA GTATTGTTGA TGGTGGGCAT TCACTGAATA GTGAAATACT CTCCCTTGCC GTCACACTCG AAATTCAAGC CATGTGGGCT TGGATAAAGC GACAGGAGTT AACATGA
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Protein sequence | MLTDVYQVAP FIRRDWLMMG SGQQLHLAQY GNPQGIPLLY LHGGPGAGAS VSELSLFNPE HYWILLLDQR GAGQSLPSGE LEHNHLNGLI CDIEAIRIRL GIERWCLAGG SFGATLALIY SGLFPNRVIA QVLWALFIPS KEGIEWLYTP SGAAQLYPQA HREFAAPSIG LADLFTHYQL GFNAQDEATR HEFARRWIQW ELTLAGVPIA LPRRLSAQQL ALAQIELHYA QNGYFNMFSV LQRVTSQVTA RTLLLQGTQD AVCPARLLAT FLTKVGNHRI EIHSIVDGGH SLNSEILSLA VTLEIQAMWA WIKRQELT
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