| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4359 |
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| Symbol | |
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| ID | 1171962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4553623 |
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| End bp | 4555593 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637346086 |
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| Product | outer membrane protein, putative |
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| Protein accession | NP_719883 |
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| Protein GI | 24375840 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAA GTAAAACGAC AATTGCTTTA GCGATGGCAG GATTTTGCTT TCAGGCATAT
GCGCTTGACA CGACATTTGT GAATAAAGAA CCGCAATTAG TTGATATTAA AAATTGGACA
TGTAAACAAT GTTCAGAAAA AACGATGTCA GGCAATATGC AAGTTGGTGT TGCCCATACC
GATAGTGACA ATAAGCGTAC ACTTAATAGC TTGGGGACGA CAGCTGGCCT TGATGCACTT
GTTGATGCGA ATGTCAAAAT GCGTACAGGT AGTCAGCAAC TGCATGCTAA AGCCTATATG
ACAGATCCTA ATATAGCCTA TGGTCAGGTC AGTATTGGTG AATATGGCTT ATATCGTGCG
AGTGTCTTTG GATCTACAAA ATTCCAACAA GATGCGAACA ATGCTTATTC GGCTCAATAC
ATCGATCAGA ATGGGTTGAT CACAAATAAA GCTTATCGTG ATGATTTATA CAAACAAAGG
GATGAGTTTG GTTTTAAAGT TGACCTAGAG TTCAATTTGT TTGATTTGAA TGTGTTTAAT
GGGATTACCT ATAAGTATGA CAATGCCTAT GGCAACAAGG CTCTCGGTCT TTTACAGCGG
CAAGCACCTT TAAAGCAAAA AGTTCAGAAT ATCATCAAAC CCTATGATAC AGAAACGAAT
ACTCTAGATG CCTTTGTGGG ATTGTCTGGT GAACAATGGC AATTAAAGCT TGATTACAGC
GGTTCTTTAT TTAGTAATTC AATTGATGCT ATAACTGATT TTAATGGAAA TCAGTTATAT
GCCGATGCGC CTGATAATGA AAGTCATCAA TTGGCAGTAA GCGGTTTTAT GCAGCTAGAT
AACACTTTAT TCGCGATGAA TGTTGCAAGA GGTGTTCAGC AACAAGATGA TGACCTGCTT
TATCATAGCG ACAGTGATTA TTTAGCTTGG AATGGTAAAG TCGAACTGAG CAACAATCAC
CTTTCAATTG ATCATAGGTT CAATACTCAA TGGAAGGTTA AAGGTGCTTT TGAGTCGAGC
TCCAGAGAGC ATTCAGGCGC GCGTTACCAA TTAGGTGATT ATGGGCAAGT TACGCGATTG
CTGGATAAGG AAATTAATAA ATACAATCTG AGTACTCAGT ATCAGTTTAA TCGTGAACTG
AAGTCTGAAG TAGGCTTCGA ATTAAAAAAT ACTGTACGCC AAGATCAAGA GCGTGAAGAG
GTTGATGAAA ACCAGTTTTG GGTAAAGGCT GATTATCGAT TCAACCCTAA TCTTAAGTTA
AATGCAAAAT TGAGTTATCT GCAACGTGAT GGTTCGGCCT ACGAGGCCAA TCAACTCACC
TCAGAGAGTA GCAATGCTAT TATCAGGAAG TATTACCTGG CTGATATGGA GGGGGGGGCA
TTTAACTTCG GTGCAAATTA CACCTATCAG TTTTTGGATT TGGGTGTCAA AACCCAATAC
AAATATAATG ACTATATACA TACTCGCTTA GGATTGACTG AAAGCACCAG TATCGGGGTG
GATGTATATT CAAATGTAAC GGTAAATAAT CAGCTCAGAA TTTATGCCAA TGCAGGTGTT
GAGCAAATTG ATAATAACCA AAGCAGCGGC TTTGAAAGTG ACCTAAATTG GTTAGCAGAT
ACTCAAGACT CTTTTGTCTA TGTTGGTGCG GGTGCCATAT ATCAAGAGTT ATTTGATTTG
CCGTTAAGCA TTAATATGGA TTATCGCTAT AGTGAATCAG ATAGTCAGAG CCGAATTCAA
CCGCGAGCGT CTGCTGATTA TTTTAATTTT ACGCATCAGT TTGATATTAG TTTAAATTAT
GAATTATCAA AGTCAGATAG CCTCTCATTG AGTTATCGTT ATGAACGTTA CTTTGATACT
GATGCCGCGA ATGTCGATAT TGATGCTATT TTGGGTTTAA CCACCCTGGG ATTAATGGAT
AATAACTTTA ATGCCCATCA AGTCAGTTTC TTATATAAGA AAAGCTTTTA A
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| Protein sequence | MKLSKTTIAL AMAGFCFQAY ALDTTFVNKE PQLVDIKNWT CKQCSEKTMS GNMQVGVAHT
DSDNKRTLNS LGTTAGLDAL VDANVKMRTG SQQLHAKAYM TDPNIAYGQV SIGEYGLYRA
SVFGSTKFQQ DANNAYSAQY IDQNGLITNK AYRDDLYKQR DEFGFKVDLE FNLFDLNVFN
GITYKYDNAY GNKALGLLQR QAPLKQKVQN IIKPYDTETN TLDAFVGLSG EQWQLKLDYS
GSLFSNSIDA ITDFNGNQLY ADAPDNESHQ LAVSGFMQLD NTLFAMNVAR GVQQQDDDLL
YHSDSDYLAW NGKVELSNNH LSIDHRFNTQ WKVKGAFESS SREHSGARYQ LGDYGQVTRL
LDKEINKYNL STQYQFNREL KSEVGFELKN TVRQDQEREE VDENQFWVKA DYRFNPNLKL
NAKLSYLQRD GSAYEANQLT SESSNAIIRK YYLADMEGGA FNFGANYTYQ FLDLGVKTQY
KYNDYIHTRL GLTESTSIGV DVYSNVTVNN QLRIYANAGV EQIDNNQSSG FESDLNWLAD
TQDSFVYVGA GAIYQELFDL PLSINMDYRY SESDSQSRIQ PRASADYFNF THQFDISLNY
ELSKSDSLSL SYRYERYFDT DAANVDIDAI LGLTTLGLMD NNFNAHQVSF LYKKSF
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