Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_4249 |
Symbol | dfp |
ID | 1171853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 4426076 |
End bp | 4427302 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637345975 |
Product | DNA/pantothenate metabolism flavoprotein |
Protein accession | NP_719776 |
Protein GI | 24375733 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTGA GCCTGATAAC GAAAAACGTC CTACTGGGTA TTGGTGGCGG CATTGCGGCC TACAAAAGTG CGGATTTAGT GCGCCGCTTA AAAGAACGCG GCTTTGATGT ACGTGTGGTG ATGAGCCAAA GTGCGATGGA ATTTATTACC CCACTCACAC TGCAAGCCTT ATCAGGGCAT CCGGTATCAT CAAGCTTACT CGATCCCGCC GCCGAAGCAG CGATGGGCCA TATTGAACTG GCGCGCTGGG CCGATTTAGT CATTATCGCC CCCGCGACGG CAAATCTGCT CGCCCGCATC AATGCAGGCA TGGCAGATGA ATTAATCACT ACCACTTGTC TTGCCACTGA AGCGCCAATT GCACTCTGTC CCGCGATGAA CCAGCAGATG TATCGCAATC TCGCCACTCA AGCCAATTTA GCCAGTTTAC AAAGCCGTGG TTATACCCTG TGGGGTCCAG CAAGTGGCAG CCAAGCCTGC GGTGAAGTGG GCCCTGGCCG CATGCTCGAA CCACTCGAAA TTGCCGAACT CGCGAGTCGC TTTTTTGCAA CAAAAGATGT CTATGCTGAA CAGGAATCAC AACCGCTAGC AGGCCAGTCG GTGCTGATCA CTGCAGGCCC AACCCGCGAA GCCATCGATC CTGTACGTTA TATCTCTAAT CACAGCTCTG GCAAAATGGG CTTTGCATTA GCGAAGGCAG CGGCCGACAT GGGCGCGGCT GTGACCTTGG TCGCAGGACC AGTAAATTTA GCCACGCCTG AAGGGGTGAC GCGAATCGAT GTCGAATCGG CGCAAAACAT GCTCGATGCC GTTATGGATA ATGTTGATAA AAAAGATATT TTTATCGGTT GCGCCGCTGT TGCCGACTAT CGCGTCAACG ATATTGCCGC CTGTAAGATC AAAAAGTCAG CGGAAGAAAT GCAACTTGCG CTAGTGAGGA ATCCTGATAT CTTAGCGACG GTCGCAAGCT TAGCAAACCG TCCTTTTGTG GTGGGATTTG CCGCAGAGAC CCACGATGTA GAAACCTACG CCCGCGATAA ACTTAAACGT AAAAATTTGA ATATGATCGC CGCAAACGAT GTATCCGTTG CTGGCCAAGG CTTTAACGCC GATGCCAATG CCCTGCGCGT ATTCTGGCCA CAGGGTAGTC AAGATTTGCC TGCTACCGAT AAACTCACGT TGGCACGGCA ATTACTTTCG TTGATAGTGA AAGAAAAAAC AAAATAG
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Protein sequence | MSVSLITKNV LLGIGGGIAA YKSADLVRRL KERGFDVRVV MSQSAMEFIT PLTLQALSGH PVSSSLLDPA AEAAMGHIEL ARWADLVIIA PATANLLARI NAGMADELIT TTCLATEAPI ALCPAMNQQM YRNLATQANL ASLQSRGYTL WGPASGSQAC GEVGPGRMLE PLEIAELASR FFATKDVYAE QESQPLAGQS VLITAGPTRE AIDPVRYISN HSSGKMGFAL AKAAADMGAA VTLVAGPVNL ATPEGVTRID VESAQNMLDA VMDNVDKKDI FIGCAAVADY RVNDIAACKI KKSAEEMQLA LVRNPDILAT VASLANRPFV VGFAAETHDV ETYARDKLKR KNLNMIAAND VSVAGQGFNA DANALRVFWP QGSQDLPATD KLTLARQLLS LIVKEKTK
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