| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4204 |
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| Symbol | tatC |
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| ID | 1171808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4370597 |
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| End bp | 4371346 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637345926 |
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| Product | Sec-independent periplasmic protein translocation protein TatC |
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| Protein accession | NP_719732 |
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| Protein GI | 24375689 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCAAC AGCAGCCACT TATCAGCCAT TTGCTTGAAC TTAGGTCCAA GCTGCTTAAA
TCCATTGCCA GTGTCTTAAT TGTATTTATT TGCAGCGTGT ATTGGGCAAA TGATATTTAC
CATTACATGG CAATCCCTTT AATGCAGTCT TTGCCCTTAG GTGGCAGCAT GATTGCGACC
GATGTCGCCG CGCCTTTCTT CGCCCCTTTC AAACTGACAT TAGTGTTGTC ATTTTTTGTG
GCAGTCCCCT ATGTGCTCTA TCAAATTTGG TCTTTTGTTG CGCCTGGTTT GTATAAGCAT
GAAAAACGTT TAGTCATGCC GCTACTTTTT AGCAGCACTG TACTGTTTTA TTTAGGGATC
GCCTTTGCGT ATTACATTGT ATTCCCTGTC GTGTTTGGCT TTTTTGCCAA CACAGCACCC
GAGGGCGTAC AAGTCGCAAC CGATATCAGC AGCTACCTCG ACTTTGTGCT GAAATTATTT
TTTGCATTCG GCCTATCCTT TGAGATCCCT ATTGCCGTTG TCCTACTCTG TTGGGCTGGT
GTCACATCAC CTGAAGATCT CAAGCAAAAA CGCCCTTATA TCATTGTCGG CGCATTCGTG
GTGGGCATGC TACTTACGCC ACCCGATGTT ATCTCCCAGA CTATGCTTGC CGTGCCAATG
CTGATATTGT TCGAAGCCGG ATTATTTGCG GCTCGTTTTT ACAGTAAACC TGATGACGAG
ACCGACGAAG AAGAATCAAC GAACAACTAA
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| Protein sequence | MSQQQPLISH LLELRSKLLK SIASVLIVFI CSVYWANDIY HYMAIPLMQS LPLGGSMIAT
DVAAPFFAPF KLTLVLSFFV AVPYVLYQIW SFVAPGLYKH EKRLVMPLLF SSTVLFYLGI
AFAYYIVFPV VFGFFANTAP EGVQVATDIS SYLDFVLKLF FAFGLSFEIP IAVVLLCWAG
VTSPEDLKQK RPYIIVGAFV VGMLLTPPDV ISQTMLAVPM LILFEAGLFA ARFYSKPDDE
TDEEESTNN
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