| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4146 |
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| Symbol | |
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| ID | 1171755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4304534 |
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| End bp | 4306183 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637345874 |
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| Product | toxin secretion ABC transporter protein |
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| Protein accession | NP_719675 |
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| Protein GI | 24375632 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGT CTTTACGTCT ATTGGCACAA CACAAATCAT TTACCGAGCT TTTGCTTTCA
TCTACCCTGA TTAATGTGCT GTCACTGGCA TTACCGTTCA CAATGTTACA AATATATGAT
CGGATTTTGC CCAATGAAGC TTACGGCACC GCCAGTGTAT TAGCGATTGG CGTTGGAATC
GCCATATTAC TAGAACTAGT ACTACGCTAT ACACGCAGCT GGTTACTTGC CCTCAACGCG
TCGAACTATG AGCTACAAAC CACAGCTCAA TTTGTCGATC GACTGATGAA GGCGGATTAC
CACCACGTAG AGCAATTAGG ATCAGGTAAA ATACTCCACG GTATCACCAG CATTGCTACC
ATGCGGGAGA TTTACTCAGG GCAAGCTGCT GTCGCCTTAA TGGATTTTCC ATTTGTTATC
ATATTTTTAG CCTTAGTAGC CTATATTGGC GGACCATTAG TCTTTATCCC AATATTGGTT
TGGGGGATAG CTGGCATTGG CGTGTGGCAA ATAGGCAAAA AACTCTCCGT CGCCACCCGA
GAACTCGCCA TCAGTGACGA TGAACGAACC CGCTTACTCA TTTTAGTGTT ATCAGGCTTA
ACGACGGCAA AATCCCTCGC GTTGGAATCG CGAATTACTT ATGCCTACAA AAAAATCAAC
TACCAAAGGT TAGCGCAGCA AAATGAGGTT GATTGGCTAT CATCCCAGTT ACAAGAATGG
ATTCAGGGGG CTTCGCAGGC TACCACACTG GCACTGGTGC TGATTGGCTG TTTTGAAGTA
TTAAATGGCG ATCTAACAAC GGGGGGATTA GCGGCATGTT CAATCCTTGC AGGCAGAGCC
GTCGCGCCCT TAAGTGCAAT TGGCAGTTTA AAAGCGAAGT TTGTTACCGC TCAGTCTGCG
ATGCAAGATG TTAACGAAAT CATAGCCTCC CCTCCAGAGT CCTTGAATGG TACTCAGGTT
TACCAGCAAA AATTACCTTC AGGCCCCATT CAATTTGAGC AGGTATCAGC ACAACAAACA
GGGGCAAAAC TTAAGCAAAT TAACCTAACA ATCCCCGCGG GTAGCCTTGT CACTGTAACC
TCAAATCCAC TCACACATGC CAGTTTATTG TTAAGTACCG TGGGCGGCTA TCATCAGGTG
ACAGAGGGTG CCATCAAGAT TGATTCTATC CCATTAACTG AACATGACCC GCTGGAGTAT
CGCCAATCCA TTAGCTATGT GTCGCCATGG GCTACGTTAC TTGCGGGCTC CATTTTGGAT
AATCTGACTC TGTTTCGCCA TGAGCGGGAA GCCTATGCCA TGGTTCTCGC AGACAAACTG
GGCTTATCTG CCACGATTGC GCAGTTACCT GCGGGTTATC AAACCTTAGT GGGTAATAAT
GACAGCCAAA TGCTCAATAA GGGGGCTATC AAGCTCATCG CCATTGTCAG AGCGCTTGCC
CAATCCCCTT CGATACTGTT ACTCGACGAG CCTATGGTCT CCCTCGATGC AGACTCTCAG
CAACGCCTAC TCGCTTTGTT ACTCGAACTC AAAAACCACA TCACCCTGAT TGTGGCCTCC
TATTTTACGG AAATTGCAGC GATCAGTGAC TATCGCATCC ATATTTCATC GCAAGGGGAC
GCAACTATGT CGTCAAATGG GGAGCTTTAA
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| Protein sequence | MIESLRLLAQ HKSFTELLLS STLINVLSLA LPFTMLQIYD RILPNEAYGT ASVLAIGVGI
AILLELVLRY TRSWLLALNA SNYELQTTAQ FVDRLMKADY HHVEQLGSGK ILHGITSIAT
MREIYSGQAA VALMDFPFVI IFLALVAYIG GPLVFIPILV WGIAGIGVWQ IGKKLSVATR
ELAISDDERT RLLILVLSGL TTAKSLALES RITYAYKKIN YQRLAQQNEV DWLSSQLQEW
IQGASQATTL ALVLIGCFEV LNGDLTTGGL AACSILAGRA VAPLSAIGSL KAKFVTAQSA
MQDVNEIIAS PPESLNGTQV YQQKLPSGPI QFEQVSAQQT GAKLKQINLT IPAGSLVTVT
SNPLTHASLL LSTVGGYHQV TEGAIKIDSI PLTEHDPLEY RQSISYVSPW ATLLAGSILD
NLTLFRHERE AYAMVLADKL GLSATIAQLP AGYQTLVGNN DSQMLNKGAI KLIAIVRALA
QSPSILLLDE PMVSLDADSQ QRLLALLLEL KNHITLIVAS YFTEIAAISD YRIHISSQGD
ATMSSNGEL
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