Gene SO_4114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4114 
SymbolmshJ 
ID1171728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp4272815 
End bp4273465 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content44% 
IMG OID637345848 
ProductMSHA biogenesis protein MshJ 
Protein accessionNP_719644 
Protein GI24375601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAC AATTTAATCA ATTAGCGCAA AAGTTTGATG CGCTGAGCCA GCGGGAGCGG 
GGATTAATAG CACTCGCCGT TTTAGTGCTT CTCGGCATGC TGGCATATAT GCCAATCGAA 
TCTCTGTGGA AACAACAGCA TTCAACCACG CAGCAATTAG AAGCACTAGA GCAGGAAAAT 
AGCGTGTCGT TGCAACAGAT TGATTTATAT CAGCAGCGAT TAGCGATGGA TCCCAATCAG 
GACTATCGTC AGCGTTTAAA TCTACTACAG CAACAAAATC AACAGATTGA TGCGCAGCTT 
AACGAGCAGA TGGTTGATAT GGTGCCCGCC GATTATATGC CAGAGTTGCT GGGTAATCTG 
CTCGGGCAGG TGCAAGGAAT TAAGTTACTG AAGTTTACCT CTATTGCACC TGTTCCATTG 
CTCGCCGTGG GTGATGAGAA AAAGTTGAAT CTCTATAGCC ATGGGATCCG CATGAGTTTA 
GAAGGGGATT ATTTCTCCGT GTTGCGTTTT GTTGAAGCGG TAGAGGCCAT GCCTGACAAA 
CTTTACTGGA AACGACTCGA CTATAAAGTG GCCGATTACC CGAAAGGGAA AATCGACATT 
GAACTTTATA CCTTGAGTAT TAATAAGGAC TTTATCAGTG TTGCTCAATA A
 
Protein sequence
MKAQFNQLAQ KFDALSQRER GLIALAVLVL LGMLAYMPIE SLWKQQHSTT QQLEALEQEN 
SVSLQQIDLY QQRLAMDPNQ DYRQRLNLLQ QQNQQIDAQL NEQMVDMVPA DYMPELLGNL 
LGQVQGIKLL KFTSIAPVPL LAVGDEKKLN LYSHGIRMSL EGDYFSVLRF VEAVEAMPDK 
LYWKRLDYKV ADYPKGKIDI ELYTLSINKD FISVAQ