| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4111 |
|---|
| Symbol | mshM |
|---|
| ID | 1171724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 4269875 |
|---|
| End bp | 4270807 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637345844 |
|---|
| Product | MSHA biogenesis protein MshM |
|---|
| Protein accession | NP_719641 |
|---|
| Protein GI | 24375598 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACTTGA AGCACTTTGG ACTGGGCCAA GCACCATTTT CGTTAACCCC TAATACCGGA
TTTTTTTTCG GGTTATCCCC GCACGTAGAG GCATTGCAAG TGCTGCAGAC CGCCCTACAA
ACCGGGGAAG GTTTTATTAA AGTCACGGGG GAAGTGGGGA CGGGTAAAAC CTTAATCTGC
CGCAAGTTGA TTAACGAACT TCCGCAGGGA TTCCACTGTG CCTATCTTCC TAATCCTTAT
TTAACTCCCG CGGAGCTGCG CTGGGCGGTA GCCAATGAGC TTGGCCTTAA ATATACCAGC
GAAATTGATC AGCAGCAGTT GACTGGGCTT ATTCAGCAGC AGTTGCTCGC CTTAAGTACC
CATGGTCATG CCATTGTGTT AGTGCTTGAT GAAGCGCAGG CGTTGCCCGA TGAAAGCCTC
GAAGCCCTGC GACTGTTCAC TAATCTTGAA ACTGAAAGTC GTAAGTTATT GCAGGTGGTG
TTATTTGGTC AGCCCGAGTT GGATGAAAGA TTAAAACGCC AAGCCTTTAG GCAATTAAGA
CAACGTATTA CTTTTAGTTA CAATCTGCGG CCGTTAACCT GGGATGAAAC CGATGCCTAT
ATCCGTTACC GGTTAGCGGT GGCTGGACAT GCGGGGCAAG CGCTGTTTAG CCCAAAGATC
ACCCGCAAGA TCGCTCAGGC ATCCCGTGGG ATCCCTAGAT TGATCAATAT ATTAGCCCAT
AAAGCCCTTA TGCTAAGTTT TGGTGAGGGT GCAACGCAGG TGCGGATGTC CCATTTGAAA
GGCGCCATTT GCGATACTGA AGATGCCAGT CCGACTAGAG TACAAAAGTG GTCGACCTAT
TTCGCTATCG CCTTTATGGT ATTTGCTGTT GCAATGTTGG CATTGCTGCT ATCGGGTACT
AATTTCCTGC AGTGGTGGGG AGATGGCGCA TGA
|
|---|
| Protein sequence | MYLKHFGLGQ APFSLTPNTG FFFGLSPHVE ALQVLQTALQ TGEGFIKVTG EVGTGKTLIC
RKLINELPQG FHCAYLPNPY LTPAELRWAV ANELGLKYTS EIDQQQLTGL IQQQLLALST
HGHAIVLVLD EAQALPDESL EALRLFTNLE TESRKLLQVV LFGQPELDER LKRQAFRQLR
QRITFSYNLR PLTWDETDAY IRYRLAVAGH AGQALFSPKI TRKIAQASRG IPRLINILAH
KALMLSFGEG ATQVRMSHLK GAICDTEDAS PTRVQKWSTY FAIAFMVFAV AMLALLLSGT
NFLQWWGDGA
|
|---|
| |