| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4097 |
|---|
| Symbol | mreC |
|---|
| ID | 1171711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 4255016 |
|---|
| End bp | 4256083 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637345831 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | NP_719627 |
|---|
| Protein GI | 24375584 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAA TTTTTGTTCG TGGTATTTCG AACCAGTTCC GTTTAACACT GGCAATTATC
CTGTCGGTGA TTTTGCTCGC GGCAAATCAC CGTCTTGAGC CTGCCCGTGA ATCCCTTTCA
TCTGCTTTAA GCCCTATTCA ATACCTCGCG AGCGTCCCCA GTGCGATCCT CGATTGGTCA
TCTGAGAGTT TTGCGACCCG CAATATGCTG GCATTGCAAA ATAAAGAGCT GTTAAGGCAA
CAATTATTAA TGAGTGAACG CCTACAGCGT TTCGAACATC TGCGTCAAGA AAACGAACGC
TTACGTGCTT TGCTTGGTTC GCCAGCCTAT CAGGATTCCC GCAAGATGGT GGTGGAGGTG
ATGGAGGTTG CCAGTGAACC TTCCCATCAC TATGTGGTCT TGAATCGGGG TTCCCGCAGC
GGTGTTTTCG TCGGTCAGCC GGTGGTGGAT GCGCAGGGGG TTGTGGGGCA AGTTGTACAG
GTTAGCGAGA TGACCAGCCG AGTGTTACTT GTATCTGACG TTTCCCACGG TTTACCCGTG
CGGATTACCC GTAATGATGT ACGTTTAATT GCTAATGGTA CGGGTGAGCT CGATGAGATT
GAGCTGCGCC ATGTGGCTAA GAGTACCGAT ATTCGAGTGG GCGATTTATT AGTCACCTCT
GGCTTAGGTA ACCGCTTTCC TGAAGGCTAT CCTGTTGCGC GAGTGATGAA AGTCTTTACC
GAAGATGGCC AAAGCTACAC GCGAGTCACG GCTCAGCCTC TGGCGGCACT TGATCGCATT
CGTTATCTGC TGCTGATTTG GCCATCACCT GACTCGGGTG TGACTTTGCC TAATCAAATC
CCTGTGCCTG CGGCGGATCA TCCGGTAGAA GAAGCCAAAC CAGATGCTGT TAATGGTGCC
ATCAATCCTC AAGGCGAAGC GCAGGGCACA AACGCCACTG TTCCTAATGC CACTGTTCCT
AATACCACTG CTCCTAATGC CACAGTTCCA AACGCGACTG CGGCACCGAG AAATGCCAAT
GGTGCATCGA ACGCTGCTAC CACCCAACCG CCAGCAGAGG TGCACTAA
|
|---|
| Protein sequence | MKPIFVRGIS NQFRLTLAII LSVILLAANH RLEPARESLS SALSPIQYLA SVPSAILDWS
SESFATRNML ALQNKELLRQ QLLMSERLQR FEHLRQENER LRALLGSPAY QDSRKMVVEV
MEVASEPSHH YVVLNRGSRS GVFVGQPVVD AQGVVGQVVQ VSEMTSRVLL VSDVSHGLPV
RITRNDVRLI ANGTGELDEI ELRHVAKSTD IRVGDLLVTS GLGNRFPEGY PVARVMKVFT
EDGQSYTRVT AQPLAALDRI RYLLLIWPSP DSGVTLPNQI PVPAADHPVE EAKPDAVNGA
INPQGEAQGT NATVPNATVP NTTAPNATVP NATAAPRNAN GASNAATTQP PAEVH
|
|---|
| |