| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4056 |
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| Symbol | metB |
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| ID | 1171680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4211241 |
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| End bp | 4212422 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637345800 |
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| Product | cystathionine gamma-synthase |
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| Protein accession | NP_719586 |
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| Protein GI | 24375543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAG GAAAATTAGT GACTGAGCGT CAATTAGCCA CATTGGCAGT GCGTCAGGGT
ATCGAAAGCG ATACTCAATA TGGCGCCGTG GTGCCGCCAA TTTACCTGTC GACGAATTAC
GCTTTCGATG GTCATAAAAA TCCGCGCGAA TTTGACTACA GTCGCTCCGG CAATCCGACT
CGCAGTATTT TAGGCGATGC CTTAGCCAAG TTGGAAAAGG GCGCAACGGG TGTGGTGACT
TGTACTGGTA TGGCAGCCAT TACCTTAGTG ACCACTTTAC TGGGCCCCGA TGATTTACTG
GTGGTGCCCC ATGATTGTTA CGGTGGCTCT TACCGTTTAT TCACTAACTT GGCGAAAAAA
GGCCAATTTA AATTGCTGGT GGTGGATCAA ACCGACAACC AAGCGCTTGC GCAAGCCATC
GCCCAGCAGC CTAAAATGGT GTGGATTGAA ACCCCCTCTA ACCCTTTGCT GCGAGTCGTC
GATATTGAGG CTATCGCGAA GGCGAGCCAT GGTGTGGGCG CGTTAGTGGT AGTGGACAAC
ACTTTCCTGT CGCCGATTTT GCAGCAACCG CTATTGCTCG GCGCCGATAT CGTTATCCAC
TCCACCACGA AATACATTAA TGGCCATAGC GATGTGGTGG GCGGCGCGGT GATCGCCAAA
GACCCCCAAA TTGGTGAGAC CTTACATTGG TGGTCAAATA CCTTAGGCTT AACCGGTAGC
GCGTTTGATA GTTATCAAAC CCTGCGTGGC CTGCGTACTT TGGCCGTGCG CATTCGCGAG
CACCAACGCA ATGCTCAGCG TATTGTGGAG TTACTGAGTA ACAGCCCTGT GGTCAGTAAA
GTGTATTACC CAGGTCTTGC GGATCATCCT GGCCATGCCA TTGCCGCCAA GCAACAAAAA
GGCTTTGGCG CTATGCTGAG TTTTGAGCTT AAGGGCGGTG AGGCTGAAGT GGTCGCCTTT
TTAGATGCGT TAAGTTTATT TAGCGTTGCC GAGAGTTTAG GTGGCGTTGA GAGTTTAGTG
GCCGTGCCTG CGACCATGAC CCACAGGGCG ATGGAGCCGC AGGCGCGTTT TGAAGCTGGC
ATTAAAGACA CCCTATTACG TTTGTCGGTT GGTATTGAAG ATGCCGACGA CTTAGTTGCA
GATATTCAAG CAGGATTGGC CGCCGTAGCG GCTTGTCAGT AG
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| Protein sequence | MTEGKLVTER QLATLAVRQG IESDTQYGAV VPPIYLSTNY AFDGHKNPRE FDYSRSGNPT
RSILGDALAK LEKGATGVVT CTGMAAITLV TTLLGPDDLL VVPHDCYGGS YRLFTNLAKK
GQFKLLVVDQ TDNQALAQAI AQQPKMVWIE TPSNPLLRVV DIEAIAKASH GVGALVVVDN
TFLSPILQQP LLLGADIVIH STTKYINGHS DVVGGAVIAK DPQIGETLHW WSNTLGLTGS
AFDSYQTLRG LRTLAVRIRE HQRNAQRIVE LLSNSPVVSK VYYPGLADHP GHAIAAKQQK
GFGAMLSFEL KGGEAEVVAF LDALSLFSVA ESLGGVESLV AVPATMTHRA MEPQARFEAG
IKDTLLRLSV GIEDADDLVA DIQAGLAAVA ACQ
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