| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4051 |
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| Symbol | |
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| ID | 1171675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4203978 |
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| End bp | 4205051 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637345795 |
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| Product | HlyD family secretion protein |
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| Protein accession | NP_719581 |
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| Protein GI | 24375538 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCGG ATCAACAATT TGCCCGTTTG GTCAAAATCG CCATGCTCGG TTTTGTGGCC
GTATTTGGCT ATTTTATGTT TGCCGACACT ATGATGCCAT TAACCCCGCA GGCTATGGCC
ACCCGCGTAG TGACTAAGGT GACTCCGCAG ATCAGCGGCA AGATCCAAAG CATTAATGTG
AACAATAACC AAGTGGTCGC CAAAGGCGAT TTACTGTTTC AAGTCGACCC AGCGCCCTTT
GAATTAGCCG TATCGCATGC CAAATTGGCC CTAGAACAAG TGCGCCAAGA TAATGCGGAG
CTTGATGCTT CTCTTTTAGC CGCTAAGGCA GAAGTCAATG CGAGTGCGAC GACTGCCCAG
CAAAAACGCC GTGAGGCCAA ACGTTTAGAT GCACTTTATG TGACTCATGG GGTTTCGCAG
CAACTGCGCG ATCAAGCCGA TAGTGATGCG GCCGCCGCCG AGGCGAATTT GTTAGCTGCG
AATGCTCGCC TTGAAAAGCT TAAAGTGAGC CGTGGTTTCT ATGGCGAAGA TAACCTTAGA
GTTCGCCAAG CGATGAATGC GTTAGCGCAA GCTGAGCTGA ATCTGTCTTA CACCCAAATC
CGTGCCGACC AAGATGGGGT GGTGACCAAC CTGCAACTTG AAGTGGGCAG TTTTGCCGCT
GTGGGCCAAC CACTACTCGC TTTAGTTTCT GATAAATTGG ATATTATTGC CGATTTTCGC
GAAAAAACCT TACGGGGTGT GAATGCCGCT TATCCCGCAT TAATCGCCTT CGATGGTGAG
CCGGGCCGCT TGTATCACGC CCAAGTGAGT AGTGTCGATG CAGGGGTGAG TGCGGGGCAG
TTTGATGCCA ATGGCCGTTT AGCCGCGCCG CAGGAGTCAG ATCGCTGGGT GCGTGATGCG
CAGCGCTTAA GACTGCACTT AGTGTTAGAT GACAGCAAGT CAGGCAACAG TGCAATGAAT
AACCTACCCG CAGGGGCACG CGCCACAGTG CAATTACTGC CTGACAATAC CCTGTTTAAT
CTGCTTGCCA AGGTGCAGAT TAAGGTTATC AGCCTGCTTC ACTATATCTA TTAA
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| Protein sequence | MTPDQQFARL VKIAMLGFVA VFGYFMFADT MMPLTPQAMA TRVVTKVTPQ ISGKIQSINV
NNNQVVAKGD LLFQVDPAPF ELAVSHAKLA LEQVRQDNAE LDASLLAAKA EVNASATTAQ
QKRREAKRLD ALYVTHGVSQ QLRDQADSDA AAAEANLLAA NARLEKLKVS RGFYGEDNLR
VRQAMNALAQ AELNLSYTQI RADQDGVVTN LQLEVGSFAA VGQPLLALVS DKLDIIADFR
EKTLRGVNAA YPALIAFDGE PGRLYHAQVS SVDAGVSAGQ FDANGRLAAP QESDRWVRDA
QRLRLHLVLD DSKSGNSAMN NLPAGARATV QLLPDNTLFN LLAKVQIKVI SLLHYIY
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