| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4039 |
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| Symbol | |
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| ID | 1171665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4193894 |
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| End bp | 4194502 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637345785 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | NP_719569 |
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| Protein GI | 24375526 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCACAC GCCTGACCGA TATTGAATTA GAACAGATCC GCGGGGTGAT TTTCGATCTC
GACGGTACGC TTGCCCATTC AAACCCTGAC TTTAAAGGCT TAAGGGCGGC ATTAGGTATC
GGATCGGGTA CCGATATTCT CGAGCATATA CATAGCCTTG AGACCACAGT GGCCAAGATG
CAGGCGCTCG AGATTGTCCA TGACTATGAG CTTGAAAGCT CGCGCCAAGC GAGCTGGATT
GAAGGGGCAC AGGCGCTGAT TGCGTTTTTA AAGACAAGGC AACTGCCGCT GGCGATTTTG
ACCCGCAATA TGCCCGAGGC GGCCAAAATT ACCATTGAAA AACTCGGTAT TGATATCCCC
TTAGTACTGA CCCGTTACGA TGCCGAGCCT AAACCTCACC CGCAGGGGAT CTACTTGATT
TGCGAGCAAT GGCAGTTGAA TCCGGCGGAT ATCTTGTATG TGGGGGATTA CCTATTCGAT
CTGCAAACCG CGCAAAACGC CGGTAGCCGC TGCGCCCTCT ACTGCCCAGA AGACGTGCCC
GACTATGCCC AAGCGGCGGA TTTACTGGTC TCTTGCTACC ACAGCCTGAT TCAAGCATGG
CCTAAATAA
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| Protein sequence | MITRLTDIEL EQIRGVIFDL DGTLAHSNPD FKGLRAALGI GSGTDILEHI HSLETTVAKM
QALEIVHDYE LESSRQASWI EGAQALIAFL KTRQLPLAIL TRNMPEAAKI TIEKLGIDIP
LVLTRYDAEP KPHPQGIYLI CEQWQLNPAD ILYVGDYLFD LQTAQNAGSR CALYCPEDVP
DYAQAADLLV SCYHSLIQAW PK
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