Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3950 |
Symbol | |
ID | 1171587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 4094980 |
End bp | 4095264 |
Gene Length | 285 bp |
Protein Length | 94 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637345707 |
Product | SpoIIAA family protein |
Protein accession | NP_719480 |
Protein GI | 24375437 |
COG category | [R] General function prediction only |
COG ID | [COG3113] Predicted NTP binding protein (contains STAS domain) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTGAAT TTGTGCAACA GGGTAACATT TGCCATCTCA AAGGGCGTTT ATCACAGGAT CAAGTGATCG CGCTTTGGCC ACAAAGGCAA AGCCTGTTAA GCCAAGATAC CCAAATCTTG TCGCTATCAG AGCTTGAGTA CAGCGATAGC GCTGGCGTGG CGTTTTTGCT GGCGTTAGTT CGTCAGCATG CTACGCCACT ACAGTTGTGC TCAGCGTCAG CGCAGTTAAA AAAATTAATC GATTTATATG ATTTACAGTC CTTCTTCAGT GAAGAAGCGA ATTGA
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Protein sequence | MVEFVQQGNI CHLKGRLSQD QVIALWPQRQ SLLSQDTQIL SLSELEYSDS AGVAFLLALV RQHATPLQLC SASAQLKKLI DLYDLQSFFS EEAN
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