| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3878 |
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| Symbol | |
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| ID | 1171521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4025510 |
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| End bp | 4026715 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345641 |
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| Product | ISSod5, transposase |
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| Protein accession | NP_719409 |
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| Protein GI | 24375366 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3328] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAC CTACTTTTGA TATCAATGCG GCCATTCAAG CACTACGTGA AGGTAAAGAC
CTCACCGGCA AGGATGGCAT CTTAACCCCT TTGATTAAGC AACTCACTGA AGCGGCCTTG
GCGGCTGAGC TGGATGGCCA CTTGGCAAGC ACTGAAGGCG CCAATCGTAA AAACGGTAAA
ACCACTAAAA CGGTTAAAAG CCCCCTTGGC AACTTCGAGT TGAACACGCC CAGAGACAGA
GCGGGCACCT TCGAACCTCA ATTAGTCAAA AAGCACCAAA CCCAACTTAC CGATGAAATG
GAGCGTAAAA TCATTGGCTT ATTTTCATTA GGCTCCAGCT ATCAAGATAT TCGTGCGCAT
ATCGAAGACA TGTACGGCAT GTCGGTGTCC AACGGCACGG TGAACGCCAT TACTGACAAG
TTACTCCCTG AGCTTCAAGC ATGGCGCGAA CGCGAACTAG AGCCGCCTTA CCCCGTCATA
TGGCTCGATG CGATTCACTA TAAAATCAAA GAGAACGGCC GCTTTATTAG CAAAGCGGTT
TACACCATTT TGGCGCTTAA CGTCGAAGGT AAAAAAGAAC TATTAGGCTT ATATCTGTCT
GATAATGAAG GGGCTCACCA TTGGTTAAGC GTGCTAACCG ACCTGTATAA TCGCGGCGTT
AAAGACATCC TCATCGCCTG CGTTGATGGC CTTAAAGGCT TTCCTGAAGC GATTGAAACC
ATTTACCCGC AGACGGAAGT GCAACTGTGT GTCATCCACC AAATTCGCAA CTCGATGAAG
TATGTTGCCT CTAAGCATCA AAAGGCCTTT ATGGCGGATT TAAAGTGCGT TTATAAGGCC
GCCACCTTGA ATGCGGCCGA GATGGCACTG GATGAGCTGG AGACGAAATG GGGCGATAAA
TACCCCGTGG TGATTAAGTC ATGGCGCAAC AAATGGGCGC TGCTATCGGT GTATTTCAAA
TACCCTGACT ATGTTCGCAC AGCCATTTAC ACCACCAATG CGGTTGAAGC GGTACATCGA
CAATTCAGGA AGTTAACTAA AACCAAAGGT GGTTTTGCTA ACGAGAACAG TTTACTCAAA
CTGCTTTACG CGGGTATATT GAAGGCCTCT GAGCGCTGGA CTCACCCCAT CCAAAACTGG
AATTTGACGC TATCACAGCT CTCAATCCAT TTTGAGGGGC GCTTAGAAAA CCATATCGAC
CTGTGA
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| Protein sequence | MTTPTFDINA AIQALREGKD LTGKDGILTP LIKQLTEAAL AAELDGHLAS TEGANRKNGK
TTKTVKSPLG NFELNTPRDR AGTFEPQLVK KHQTQLTDEM ERKIIGLFSL GSSYQDIRAH
IEDMYGMSVS NGTVNAITDK LLPELQAWRE RELEPPYPVI WLDAIHYKIK ENGRFISKAV
YTILALNVEG KKELLGLYLS DNEGAHHWLS VLTDLYNRGV KDILIACVDG LKGFPEAIET
IYPQTEVQLC VIHQIRNSMK YVASKHQKAF MADLKCVYKA ATLNAAEMAL DELETKWGDK
YPVVIKSWRN KWALLSVYFK YPDYVRTAIY TTNAVEAVHR QFRKLTKTKG GFANENSLLK
LLYAGILKAS ERWTHPIQNW NLTLSQLSIH FEGRLENHID L
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