| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3874 |
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| Symbol | |
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| ID | 1171517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4021219 |
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| End bp | 4022190 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637345638 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_719406 |
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| Protein GI | 24375363 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATAA ATAACAATAT AAAAGAGCTG TCAATAGCTC ATCTTCAGCT AATTGTTTGC
CTTATAAAGC ATGGGAACTC ATGTGTCGTC TCAGATGAAC TTGGGATTAG CCAATCATCT
ATTAGTTACC ACTTACGTCG ATTAAGAGTT ATCTTTGCTG ATGAAATGTT TATCCGTACT
GGAAAAGGCC TAAAACCGAC TGAACGTTGT ATTCAAATTG GCCATTTCGC CCAAGACCTC
ATTAATCGTG TTGAGGAAGA ATTAATTCAT GCTAATGATT TTGTTCCAAA GCAAATGAAA
CGAGAACTCA CATTAATCGC TGCCGATACG GCATGTGGTT GGTTTAGCAC ACTCTTTAGC
GATATGCAAA AAACACTTCC TAGAGTCACA CTTTGTGCTC GCCCATGGAA TTTAAAATCA
ATGGAAGATT TAGATAGTGG CGCAGTTGAT TTTGGTATTC ATATTATCGA AAACTCAAAA
AAGGGGATTT ATGATATGGA TATCGCACCT TGCTATAGAC TATGTGTAGT AAGGGATGGA
CACCCCCTAA TTTCTAAAGG AGAAGTTACA TTAAAGGATC TAGAACAATA TCCAGTGTTG
ATTAATGACT TAGGAGGCTG GAATAATGAT GGAAACTCCC TAATGCAACG AGTCTTAGAA
AAACACGGTC TCAAACTAAA TATTGCAGGA CGCCTAGGCT ATATTAATAG CATTTTCACG
GCCCTACACA CTAGTAATGC CATTACATAT ACTTCTGCAG CATCCATACC TCAATCAATA
CCTGGTCTTA CTTTACTTAG AGGACCAAAG GAGGTAAATG AAGTCGACTG TTTCTACCGG
CTTTACATTA GCAGAATGCG TTATGGATCT CAGGAAACTA ATTATTTAAT TGATTTTATA
TACGATTCCT TTAAACACTT TCTAACCCAA CAATATAATC GGATTGATAT AGCTGCAGTA
ATAAATAAAT AA
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| Protein sequence | MIINNNIKEL SIAHLQLIVC LIKHGNSCVV SDELGISQSS ISYHLRRLRV IFADEMFIRT
GKGLKPTERC IQIGHFAQDL INRVEEELIH ANDFVPKQMK RELTLIAADT ACGWFSTLFS
DMQKTLPRVT LCARPWNLKS MEDLDSGAVD FGIHIIENSK KGIYDMDIAP CYRLCVVRDG
HPLISKGEVT LKDLEQYPVL INDLGGWNND GNSLMQRVLE KHGLKLNIAG RLGYINSIFT
ALHTSNAITY TSAASIPQSI PGLTLLRGPK EVNEVDCFYR LYISRMRYGS QETNYLIDFI
YDSFKHFLTQ QYNRIDIAAV INK
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