Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3812 |
Symbol | ppiA |
ID | 1171454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3964412 |
End bp | 3964999 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637345579 |
Product | peptidyl-prolyl cis-trans isomerase A |
Protein accession | NP_719348 |
Protein GI | 24375305 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGTT GGATATCTGC ACTCTTAGTT CTCTGTGCTA GTTATAGCAG CTGGGCGGCA ATCGACATTC AACCCGATAG CTTGTATCCC CAAGTCGAGT TTGATACGAG TTTAGGTAAG ATTGTTGTCG AACTCGATAG AACCCGCGCC CCCATTACAG TCGATAACTT CCTCACCTAT GTGGTCAAAG GTGAGTACAA CAACACGATT TTCCATCGCG TGATCAGTGA CTTTGTAGTG CAAGGCGGTG GACTGAATCC GCAATTAGAA GAGTTGCCAG CGGGCAAGCC CATAGTCAAC GAGTCGGGCA ATGGTTTATC CAATAGCATG GGCACCATTG CCATGGCGCG CGACAATGAA CCCCATTCGG CCACCCGCCA GTTTTACTTT AACGTTGCAG ACAACACTAA GCTTGACCCC TCAAAACGTC GTTGGGGTTA TGCGGTATTT GGTGAAGTGA TTGAAGGTAA GCAAGTACTC GAAGCCATGG CCGTAGTAGA GACAACCACT AATGCCAAAC TGAATTGGCC CGATGTACCT GTCACTCCTA TCATATTGAA AACAGCTAAA TTACTCCCGA AAAAATAA
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Protein sequence | MFRWISALLV LCASYSSWAA IDIQPDSLYP QVEFDTSLGK IVVELDRTRA PITVDNFLTY VVKGEYNNTI FHRVISDFVV QGGGLNPQLE ELPAGKPIVN ESGNGLSNSM GTIAMARDNE PHSATRQFYF NVADNTKLDP SKRRWGYAVF GEVIEGKQVL EAMAVVETTT NAKLNWPDVP VTPIILKTAK LLPKK
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