Gene SO_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3810 
Symbol 
ID1171452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3963112 
End bp3963675 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content44% 
IMG OID637345577 
ProductOmpA-like transmembrane domain-containing protein 
Protein accessionNP_719346 
Protein GI24375303 
COG category 
COG ID 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACT TAACAATTAG AACTTGGCTT TTATCGTTAT CAGTTTGTGC TTTTTTCGTC 
GGGGCTAATG CTAATGCCGC TGATCCATCG CATGTGTTAG GTGGCAGCTT AGGCTATGGG 
ACCCAAGAAT TTGAAACTAA GAGCGGTAAA TATGATGCGG GTGATACATT CACTGGCGAT 
TTATATTATC GCTATATGTT CAACGAGCAT TTTGGGCTTG AAGCGGGTTA TTTAGCGGGT 
TCTGGTGGCG TGGCGAGCGC CCTTGTTAGT GCAATCAGTG ATATAAAAGA CTTACGTTAC 
CAAGGTGTTA GAACCACTGC CTACGGTGAG TATGCATTGT CTCGCGGGAA TAGTCTGTAT 
GCCAAACTCG GTGCTGCTTA TACCAAAGTG AGTTATGAGT TTGAAAAGCA GGAGATGGAT 
TCAGACGATG TGGGCTTTTA CGGCGCAGTT GGTTGGCAAT ATCGTTTTCG CTCTGGCTTT 
GGTCTTAATC TTGAGTACCA ATATGTGCCG ATGAAAGAGC TTGAGTTGCA AGGAGTCAAC 
TTTGGCATGA GTTATCGTTT CTAA
 
Protein sequence
MKYLTIRTWL LSLSVCAFFV GANANAADPS HVLGGSLGYG TQEFETKSGK YDAGDTFTGD 
LYYRYMFNEH FGLEAGYLAG SGGVASALVS AISDIKDLRY QGVRTTAYGE YALSRGNSLY 
AKLGAAYTKV SYEFEKQEMD SDDVGFYGAV GWQYRFRSGF GLNLEYQYVP MKELELQGVN 
FGMSYRF