Gene SO_3765 details

Gene Information

• Locus tag: SO_3765
• ID: 1171413
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3914606
• End bp: 3915295
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637345539
• Product: hypothetical protein
• Protein accession: NP_719302
• Protein GI: 24375259
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCATTC TGAATAAAAT TTTAACAGCG TTTCGCGGTG GTGCCACCGA AGTTGGCCAA 
AGCATCGTAG ACGCAAACTC AACCCGAATT TTCGAACAGG AAATCCGTGA CGCTGAGAAA 
CATTTAACCA ACGCCAAGCG CGAACTGACT GATGTGATGG CCAAAGAAAT GCAAGCCAGT 
CGCGAAGTTG ACCGCTTAAA GCGTTCAATT GCAGAGCACG AAGGTTATGT AACCCAAGCT 
TTAGATAAAG GCAATGAAGC TTTAGCGATT GAAGTTGCGG AAAAAATTGC TCAATTAGAG 
CAAGAACTGG CAGAGCAACA AACCGCAAAT GATAGCTTCA GCGCCCATGC TCTGCGCTTG 
AAAGATTTGG TGAAGAAAAC CGAGCGTCAA CTGTCTGATT ATCAACGTCA GTTAAGCATG 
GTTAAAACCA CCGAAAGCGT GCAAAAAGCT ACAGCAACGA TTACCGATTC TTTTGCGTCA 
AGCAACTCTA AACTGCTGAA TGCGAAAGAT TCATTAGAGC GTATCAAGGC TCGTCAGCAA 
CAGTTTGACG ACAGACTGAA AGCCGCTGAA ACCTTAGCCG AAGAAGGCAG TGATAAATCA 
TTGCAGGCTA AGTTAGCCGA AGCGGGTATC GGTGAGCAAA AATCGAATGC TAACGCTGTG 
CTTGAGCGTA TCAAGGCACG TAAAAGCTAA 

 

Protein sequence

MGILNKILTA FRGGATEVGQ SIVDANSTRI FEQEIRDAEK HLTNAKRELT DVMAKEMQAS 
REVDRLKRSI AEHEGYVTQA LDKGNEALAI EVAEKIAQLE QELAEQQTAN DSFSAHALRL 
KDLVKKTERQ LSDYQRQLSM VKTTESVQKA TATITDSFAS SNSKLLNAKD SLERIKARQQ 
QFDDRLKAAE TLAEEGSDKS LQAKLAEAGI GEQKSNANAV LERIKARKS