Gene SO_3657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3657 
Symbol 
ID1171316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3810832 
End bp3811521 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content48% 
IMG OID637345446 
Productamino acid transporter LysE 
Protein accessionNP_719199 
Protein GI24375156 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTGGC CAGTGTTAAA CTGTCGCTCC TGTGAAGGCC TTCTTGTGGG CCTTTTATGC 
GCTGAAGGGG TAAAGATGAG TTTTAGTACA TGGTTAGGAT TGCTTGCGAT TTGTTGTTTA 
GGGGCCATGT CACCCGGGCC TAGCTTAGCC ATGGTGGTGC GTCATACCTT GGGCGGTGGA 
CGCGGCAAGG GAATTATTTG TGCTTGGGCA CACTCGATTG GTATCGGCAT TTATGCGTTG 
GTGACACTAC TTGGGCTTGC GGTGGTGTTG AAAAAGGCGC CCCTGATATT TAATGGTATC 
GCTATATTAG GTGCCGTTTA TTTGGCATGG ATGGGCATTC AAGCGCTGCG CTCAAATGGT 
GGCATGCAAG CAAAACTTGC GGCCGGCGAG GCTACAGATG CACTTACAGC GGCGCGCGAT 
GGCATTGCGA TTTCCCTCTT CAACCCCAAG ATTATGCTGT TCTTTTTAGC ATTATTCAGT 
CAGTTTGTAA TGGTGGCCGA TAGTTTTACC GGTCAAGCAC TGATCGTATT AACGCCAATG 
GTGGTGGATG GACTTTGGTA CAGCTTAATT GCTTTAGTGT TATCCCACTC GAGTGTATTA 
CCCAAATTGC GGGAAAAAGC AGGGTTGATT GATAAACTCT CTGGCGTGGT TTTGATTCTG 
CTGGCAATAA GAGTGCTGTA TACCCTTTAG
 
Protein sequence
MGWPVLNCRS CEGLLVGLLC AEGVKMSFST WLGLLAICCL GAMSPGPSLA MVVRHTLGGG 
RGKGIICAWA HSIGIGIYAL VTLLGLAVVL KKAPLIFNGI AILGAVYLAW MGIQALRSNG 
GMQAKLAAGE ATDALTAARD GIAISLFNPK IMLFFLALFS QFVMVADSFT GQALIVLTPM 
VVDGLWYSLI ALVLSHSSVL PKLREKAGLI DKLSGVVLIL LAIRVLYTL