| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3631 |
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| Symbol | hprA |
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| ID | 1171292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3789338 |
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| End bp | 3790294 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345422 |
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| Product | glycerate dehydrogenase |
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| Protein accession | NP_719173 |
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| Protein GI | 24375130 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAG TTGTACTCGA TGGTGAAACC TTAAATCCTG GGGACTTAAG TTGGCAGGCT
ATCAGCGACT TAGGGAAATT TAGCTGTTTT GCCCGCACGC CCGATGCCGA GATTATCCCT
CGTGCTCAGG ATGCTGAGAT TGTATTCACC AATAAAACTC CTCTTGATGC CAAGACGTTA
GCGCAATTAC CTAAGCTTAA GTATGTCGGC GTGCTGGCAA CGGGCACTAA TGTGGTGGAT
ATCGCTGCTG CAAAAGACTT AGGCATCGTC GTAACAAACG TACCCGCCTA TGGACACGAT
GCCGTGGCGC AAATGGTCTT TGCCCATATT TTGCATCACA CCCAAGCGGT TGCTGCGCAC
CATCAGGCCG TTGCAGCAGG GCAATGGACG AGTTGCAGTG ACTTTTGTTT TACCTTAATG
CCGCTGCAAT CCCTTAAAGG CAAAACCTTA GGACTGATTG GGTATGGCGA TATTGGTCAA
CAGGTCGCCA AACTTGCCTT AGCCTTCGGC ATGAAAGTAT TAGTCAATAC CCGCACTGAA
CCCGCACACT TACCCCAAGG CGTCAGTTGG ACATCACGGG ATAAGGTCTT AAAGGAGTCT
GATATTCTCT CGCTCCACTG CCCATTAACC CCAGAAACTA ACGAGCTTAT CAACGCTCAG
ACCCTTGAGT TGATGAAGCC GCAGGCGCTA CTGATCAACA CTGCGCGCGG TGGATTAATT
GATGAGGCGG CGCTTGCTGT TGCATTAACG CAGGGCAGAG TCTTTGCTGG CGTTGATGTG
TTATCAACTG AGCCACCGAG TATGGATAAT CCGCTACTCA GTGCGCCTAA TATTAGCACC
AGCCCGCACA ATGCCTGGGC GACAAAGGAA GCGCGGCAGA ATTTACTTAA TATCGCGACG
GAAAATCTTA AGTCCTTTCT CCAAGGGAAT ATTCGCAATT GTGTAAATAG CAAATAA
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| Protein sequence | MKIVVLDGET LNPGDLSWQA ISDLGKFSCF ARTPDAEIIP RAQDAEIVFT NKTPLDAKTL
AQLPKLKYVG VLATGTNVVD IAAAKDLGIV VTNVPAYGHD AVAQMVFAHI LHHTQAVAAH
HQAVAAGQWT SCSDFCFTLM PLQSLKGKTL GLIGYGDIGQ QVAKLALAFG MKVLVNTRTE
PAHLPQGVSW TSRDKVLKES DILSLHCPLT PETNELINAQ TLELMKPQAL LINTARGGLI
DEAALAVALT QGRVFAGVDV LSTEPPSMDN PLLSAPNIST SPHNAWATKE ARQNLLNIAT
ENLKSFLQGN IRNCVNSK
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