Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3506 |
Symbol | |
ID | 1171180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3657713 |
End bp | 3658711 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637345308 |
Product | SIS domain-containing protein |
Protein accession | NP_719053 |
Protein GI | 24375010 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2222] Predicted phosphosugar isomerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAACA CTATTATGGA ACAAGAAGCG CGAACCGCAC CGCAGAAGAT AGCGGGTCAG TTAGCCGCTA ACGCCGATCT TATGCAGCAG TTAGGTGAAA AACTGCGTGC TTTTGATCCT CGTTTTGTGA TGATCGTTGG CCGTGGTTCC TCGGATCATG CCGGCGTGTT TGCTAAGTAT CTGTTTGAAA TCGAAGTCGG TGTGCCAACG TTTGCCGCTG CACCATCGGT AGCCAGCGTT TATGGTAAAA CCTTGAAGTT AGAAGGCGGA TTAGTGATTG TGATTTCACA ATCTGGCCGC AGCCCTGATA TTTTAGCCCA AGCGCGTATG GCAAAAAATG CGGGTGCCTT TTGTGTGGCA TTAGTCAATG ATGAAACCGC GCCAATCAAG GACATCGTCG ATGTGGTGGT GCCATTACGT GCTGGCGAAG AAAAAGCCGT TGCTGCAACC AAGAGTTATC TCGCCACATT GTCAGCAATT TTGCAATTAG CCTCGGCGTG GACGCAGAGC GAATCCCTTG CCGCAGCGGT AAGCTCTTTA CCGCAAGCGC TGCAAACGGC GGTTGTTGCT GAGCCACAAC TGACGCCTGA GTCAGTTGAA AACGTTAAAA ACTTAGTCGT GTTAGGCCGT GGCTTAGGTT ATGCGGTGTC TAAGGAAATT GCGCTTAAGT TAAAAGAAGT ATGCTCAATC CACGCAGAAG CCTTTAGTAG CGCAGAGTTT CTCCATGGTC CAGTGACCTT AGTTGAGAAA AAACTCACGA TTGTGGATGT GTGCATTGGC GATGAGTCTT ACGCTAGCCA TATCGAACAG ATTGAAAATG TGAGCCAACG TGGTGCCGAT TTAGTGCATT TAAATCAAAC GTCGACGGAT ATTCACCCAC GAGTGGCGCC GTTAGCCCTG CTACAACGTT TTTATATTGA TGTTGCCGCA GTAGCCATTG CCCGTGGTAT TGATCCAGAC CAACCAGCAG GGCTGAAAAA AGTCACTCAA ACGCTGTAG
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Protein sequence | MTNTIMEQEA RTAPQKIAGQ LAANADLMQQ LGEKLRAFDP RFVMIVGRGS SDHAGVFAKY LFEIEVGVPT FAAAPSVASV YGKTLKLEGG LVIVISQSGR SPDILAQARM AKNAGAFCVA LVNDETAPIK DIVDVVVPLR AGEEKAVAAT KSYLATLSAI LQLASAWTQS ESLAAAVSSL PQALQTAVVA EPQLTPESVE NVKNLVVLGR GLGYAVSKEI ALKLKEVCSI HAEAFSSAEF LHGPVTLVEK KLTIVDVCIG DESYASHIEQ IENVSQRGAD LVHLNQTSTD IHPRVAPLAL LQRFYIDVAA VAIARGIDPD QPAGLKKVTQ TL
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