Gene SO_3506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3506 
Symbol 
ID1171180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3657713 
End bp3658711 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content49% 
IMG OID637345308 
ProductSIS domain-containing protein 
Protein accessionNP_719053 
Protein GI24375010 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2222] Predicted phosphosugar isomerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACA CTATTATGGA ACAAGAAGCG CGAACCGCAC CGCAGAAGAT AGCGGGTCAG 
TTAGCCGCTA ACGCCGATCT TATGCAGCAG TTAGGTGAAA AACTGCGTGC TTTTGATCCT
CGTTTTGTGA TGATCGTTGG CCGTGGTTCC TCGGATCATG CCGGCGTGTT TGCTAAGTAT
CTGTTTGAAA TCGAAGTCGG TGTGCCAACG TTTGCCGCTG CACCATCGGT AGCCAGCGTT
TATGGTAAAA CCTTGAAGTT AGAAGGCGGA TTAGTGATTG TGATTTCACA ATCTGGCCGC
AGCCCTGATA TTTTAGCCCA AGCGCGTATG GCAAAAAATG CGGGTGCCTT TTGTGTGGCA
TTAGTCAATG ATGAAACCGC GCCAATCAAG GACATCGTCG ATGTGGTGGT GCCATTACGT
GCTGGCGAAG AAAAAGCCGT TGCTGCAACC AAGAGTTATC TCGCCACATT GTCAGCAATT
TTGCAATTAG CCTCGGCGTG GACGCAGAGC GAATCCCTTG CCGCAGCGGT AAGCTCTTTA
CCGCAAGCGC TGCAAACGGC GGTTGTTGCT GAGCCACAAC TGACGCCTGA GTCAGTTGAA
AACGTTAAAA ACTTAGTCGT GTTAGGCCGT GGCTTAGGTT ATGCGGTGTC TAAGGAAATT
GCGCTTAAGT TAAAAGAAGT ATGCTCAATC CACGCAGAAG CCTTTAGTAG CGCAGAGTTT
CTCCATGGTC CAGTGACCTT AGTTGAGAAA AAACTCACGA TTGTGGATGT GTGCATTGGC
GATGAGTCTT ACGCTAGCCA TATCGAACAG ATTGAAAATG TGAGCCAACG TGGTGCCGAT
TTAGTGCATT TAAATCAAAC GTCGACGGAT ATTCACCCAC GAGTGGCGCC GTTAGCCCTG
CTACAACGTT TTTATATTGA TGTTGCCGCA GTAGCCATTG CCCGTGGTAT TGATCCAGAC
CAACCAGCAG GGCTGAAAAA AGTCACTCAA ACGCTGTAG
 
Protein sequence
MTNTIMEQEA RTAPQKIAGQ LAANADLMQQ LGEKLRAFDP RFVMIVGRGS SDHAGVFAKY 
LFEIEVGVPT FAAAPSVASV YGKTLKLEGG LVIVISQSGR SPDILAQARM AKNAGAFCVA
LVNDETAPIK DIVDVVVPLR AGEEKAVAAT KSYLATLSAI LQLASAWTQS ESLAAAVSSL
PQALQTAVVA EPQLTPESVE NVKNLVVLGR GLGYAVSKEI ALKLKEVCSI HAEAFSSAEF
LHGPVTLVEK KLTIVDVCIG DESYASHIEQ IENVSQRGAD LVHLNQTSTD IHPRVAPLAL
LQRFYIDVAA VAIARGIDPD QPAGLKKVTQ TL