| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3493 |
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| Symbol | mexE |
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| ID | 1171167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3643118 |
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| End bp | 3644548 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345297 |
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| Product | RND multidrug efflux membrane fusion protein MexE |
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| Protein accession | NP_719042 |
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| Protein GI | 24374999 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATCA AGTTGTCACA AAATATTACA TACTCATCGG TACAAAATCT ATTGACAGGG
TCATTTTACA ATATATATTA CCGTTCAGTA CATAATATTT TTTACCAATC GGTATTTATT
GATTTTGACC GAGTGCCCAT CAGTGATGTC TGTCTTAAAC GAGATAAATG CCTGCCACAT
GAGGATTGTA AGATGATAAG TAACCCAACT TTACGGACAT TGATGTTGAC TACCGTGGCG
GCGTTTGTCC TTTCGGCCTG TGGCGAACCC GAAGTCCTGC AGGGGCAAGC ACCGGCTGCA
CCTAAGGTGG ATGTTGCGCA GGTATTGCAG GAGCGAGTCA CCGAGTGGGA TGAATTTACC
GGTCGTTTGC AGGCACCTGA GAGCGTGACC TTAGTGCCAC GCGTGTCTGG CTATATTGCA
TCGGTGAATT TTAAAGAAGG CGCTTTAGTT AAAAAAGGTG ATGTGCTATT TCGTATCGAT
GCGAGTGTGT TCGAAGCGGA AGTGGCCCGG TTAAAAGCAG ATCTTGCTAG CGCGCTCTCT
GCTGATCAAC TGGCCACTAA CGACTTAGAA CGTGCCCGCA AACTCTTTGT CCAAAAGGCG
GTATCCGCGG AATTACTTGA TACCCGCGAG TCCAATAAAC GACAAACCAC AGCGGCCGTA
GCTTCAGTGA AGGCAGCGCT GCTGCGCGCC GAGCTGGATT TGGATTACAC CCAAGTGCGC
GCCCCGATTG ATGGCCGTGC GTCCTATGCC AATGTCACCG CGGGTAACTA TGTCAGTGCT
GGGCAGAGTG TACTAACCCA TTTGGTCTCT ACCGCTAGCA TGTATGCCTA TTTTGATGTA
GATGAGCAAA CCTACCTGAA ATACGTCAAA TTGACCGCTG AAAAAAAGCG TAACGACCCT
CGTGCTGGCG ACAATCCCGT ATATATGGCG CTGGCAAACG AGCGCGAATA TCAACACGTC
GGCATAGTCG ATTTTGTTGA TAATGCGATG GACAGACAGA CGGGCACTAT TCGAGTTAGA
GCCACATTTA GCAATGAAGA CAACAGTTTG CTCCCTGGCT TGTTCGCTAG GCTGCGTACT
GCTGGTAGCA GCGCCTACGA CGGTATCTTG ATCGACGATA AAGCCGTGGG AACGGATCTG
AATAACAAAT TTGTGTTAGT GGTAGCAAAT GATGGCACTG TGGAGTATCG CGGTGTCACC
CTAGGTGAAA AAGTTCAAGG ATTACGGATT GTTAAGCAAG GTTTGGCAGC AAACGACAAA
ATTGTGGTCA ATGGTATGCA GAGGGTTCGT CCTAAGATGC AAATTGAGCC ACTGCTAGTC
GATATGGCTG ACAGCGAGCA GCTAGAGGCG CTTCGTCATG CTCAGCTAAT GCTTGATAAA
AACCAAGAAA ACCTAACAAC TCAAGCCGTT GAAGTGGCAA GCCGCGGATA A
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| Protein sequence | MFIKLSQNIT YSSVQNLLTG SFYNIYYRSV HNIFYQSVFI DFDRVPISDV CLKRDKCLPH
EDCKMISNPT LRTLMLTTVA AFVLSACGEP EVLQGQAPAA PKVDVAQVLQ ERVTEWDEFT
GRLQAPESVT LVPRVSGYIA SVNFKEGALV KKGDVLFRID ASVFEAEVAR LKADLASALS
ADQLATNDLE RARKLFVQKA VSAELLDTRE SNKRQTTAAV ASVKAALLRA ELDLDYTQVR
APIDGRASYA NVTAGNYVSA GQSVLTHLVS TASMYAYFDV DEQTYLKYVK LTAEKKRNDP
RAGDNPVYMA LANEREYQHV GIVDFVDNAM DRQTGTIRVR ATFSNEDNSL LPGLFARLRT
AGSSAYDGIL IDDKAVGTDL NNKFVLVVAN DGTVEYRGVT LGEKVQGLRI VKQGLAANDK
IVVNGMQRVR PKMQIEPLLV DMADSEQLEA LRHAQLMLDK NQENLTTQAV EVASRG
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