Gene SO_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3378 
Symbol 
ID1171056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3516812 
End bp3517384 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content43% 
IMG OID637345183 
Producthypothetical protein 
Protein accessionNP_718932 
Protein GI24374889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGAT ACATTAAAAA TATGTCAAAG CTTCAAGGAT TTATTATCTA TAACGCCTTG 
AGTTTTCAGT GTGTTTGGTG GAGTAGCATC TTATGGGGAA ATGGAGTATT GCTTCTCAAT 
ATCCCTTTGT TATTGATTCA TTTTATGCTG TTGGCTTTAG TTGAAAACCG ACAAGCTGTG 
CTTCGGGACT TCAGTACCAT GGTTAAGGTG GGGCTGCTGG GTATCGTTAT TGATGTCCTG 
CTTACCTTGT TCGGGGTATT TGAGTTTACC GTTTTACCTT GGTGGCTCGC CTGTCTATGG 
CTGCATTTTG CCTTGAGCCT GCACCATAGC CTTATTTTTA TGCGTGCTTT ACCTATTCTT 
TTGCAGGTTA TATTGGGCGG TGTATTTGGC AGTCTTAGCT ACATTGCGGG CGCACAATTT 
AATGCGGTGA CGCTTCCTTT TGGCGAAAGT GTTTCCATGC TTATCCTTGC TGTTGTTTGG 
GCTATCTTAT TGCCGCTGTT TATCAAAATA TCCCGTAGTG ATAGGCAGAT AAGTCGTTAT 
GGGCTAGAAA CTCATCGCCT GTGCGATCGT TAA
 
Protein sequence
MVRYIKNMSK LQGFIIYNAL SFQCVWWSSI LWGNGVLLLN IPLLLIHFML LALVENRQAV 
LRDFSTMVKV GLLGIVIDVL LTLFGVFEFT VLPWWLACLW LHFALSLHHS LIFMRALPIL 
LQVILGGVFG SLSYIAGAQF NAVTLPFGES VSMLILAVVW AILLPLFIKI SRSDRQISRY 
GLETHRLCDR