| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3306 |
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| Symbol | |
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| ID | 1170992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3455194 |
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| End bp | 3458709 |
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| Gene Length | 3516 bp |
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| Protein Length | 1171 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637345115 |
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| Product | sensor histidine kinase |
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| Protein accession | NP_718860 |
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| Protein GI | 24374817 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAGGT CTAATGTTGG CTCACAATGC TATCAAAAAA GACTGACACT TATGAGTCGT
TGTTATTACC TATCTATTTT TCTAGTTTTT TGGTCTTTTA TTGTATCTGC GCAAGCTAAG
GCAGCCTATT ATCCCTTAGC ACAACAAATT AGTAGTGAAA ATGGTCTGTC TCAAAATGTG
GTGCTTGCAT TAGAGGAAGA TAACTATGGG CGTATATGGG TTGGTACCCA AGATGGGTTA
AACCTAATTA ACAATAATGA ACTGCTCGTA TTCCGTCGCG ACCAAGCTGA GCATCGTTTG
TCGGGAACAG TTATCACCGA TTTAACATTA GATCAACAAG GGCGATTATG GGTTGCTAGT
GATGTGGGCT TAGATTATAT AGATACTACT ACGCTTGAGA GTCATGTTAT TACCTTAAAC
CAATCTATCT CTCATATGCT GTTACATACT GAGCAGACAA TATTTTATCT TTCATCGCAA
AAACTTTATC AGTTTCAGAT TAACACGGGT CAGGTTCAAG AAGTTAAACT GCCGGAGTTA
TTCCAGATTA TAAATACATT AGGATCTTAT GATGAACAGC ATTTGCTCTT AATCGGTCCA
AATGGTTTTG GGGTATTAAA TTTGAGTACT GGGGATGTCA CTCCCCTACA ACCTGACATT
CCCGCAGGAA CTTATAAAGC GAGCACTATC TCAGCAGAAC GCATTTGGAT TAGCCAGATG
GAACAGGGAC TATACTCCTG TAATTTGCAG GGATTAGATT GCCGCACATA TTCCAAAGCA
AACCAAAAAT TACCTACAAA TAATATTGCT CAGATCTACC AGCAAGACAC TGCGTTGTTC
CTTGCAACAG ATAAAGGTAT TGGCCGTCTA GATTTGATCA CAGATAAGTT AGAATGGATT
TATCCACATA GCCAAAATAA TGCTTACCAA GCATCACGCA TTGCCCGAAA TCTCATCCCT
GCCAAATCTG GGGATATTTT CGTTGGAACC TTTAATGGCT TATATCGGAT ACCGAATACA
TATAAAGAAG TTCAAGCGTT TAATACAGGG ATTGGTGGGT ATCCTAGTAA TCAACTTGCC
GTTAATAAGG TCATGTTAAA TGGACAAGAG CGATTAGTGA TTGCTCAACC TGATAAGCTT
ACGTTATGGA CTTTAGACGC TAGCATTTTG CGTCTATATC GTGAATATGA TTACCCTCAG
GGATTTGTAC CCACAAATCT ATTCGTAGAT GGGGGGGATA TTTATCTATC ATCATTAACA
AATAACAATC TTATTCTTAC ACCACATAAC GGTGCTTTTA CCTCTTTAGA AGAACGATTT
GCACAACTCG GAAATGTCCA ATTATTTAAT ATGAATCAAC CTCAAGAGGA CATTAGAGTA
TTTCATTTAC TAACAAGTAT GAAGGTTTAC CAACAGCGGC AAAATAAATG GCAATTACTC
TGGGAAAAAC CATTCTTAAC AGGGAGTGCT ACGGCAGAAT ATTGGCAGGG GCGACTCTAC
GTGGCCTCCT ACCAAAATGG CTTGATGTCG GCATCGATGG ATAATGACTG GCAAAAACCG
CAGCAGTGGC AACAACATCA TGGTTTAGGT ATTGCGATAA ACTTGTTTGC TCAAAAAGAT
AAACTGTATG TGCTTACTGC AAATCTTGGA CTTTTCCAGG TCGATTCATC GAGTCCTATC
AGTATTACTC AGGTATCAAG CCGTGATAAA TTAGCCAGTC AAACTTTAGT TTGTGCTATC
AGAGATCATA ATGGGCAGCT CATCTTATCT AGCCATAAAG GTCTCGTCAT ATTTGATTCT
CAGCAGGAAT CACTCATTTA TTTAAGTTCT TTACAGGGCA CTCATGAGCA GGAGTTTAGT
CAATTTAGTT GCGGTACTTT GAATAATGTT CCGTACTTTG CTGGAGAGAG AGGCTTGACT
CTAGTGTTTG ACTCCCAAGC AATCAAAAGT CCAGCCCCTC AAATTACATG GACCCATTTA
GATGTTGATG GTCTTACGTA TCGTTTGGGT TCAAGTGGAA CTGGTAAGTT AACTGCCCCA
GAGTTTATTC GATTACATTT TGTTGCAACA CCGTCAGATT TACCCAAACA AGCAAGTTAC
CGCTATCGAA TAAAATCGCT TTCTGATGAG TGGGTTGAAC TAAAGTCGTC GTTTATCCCC
ATGATAAACT TGCGGCCAGG TAGTTATCAG GTTGAACTTG AGAGTCGTGA TTTTTCGGGG
AGAAGTAGCC CTATCGCGTT GGCTACATTA GAAATAGCCC CCGGATTTTG GGAGTCATCA
TTAGCAATAA GTCTTTATAT TTTTATCGGT TTAGTCGTCA TTGCTTTACT CGTGAGCCAT
AGGATTAAAG CAGATAGAAG TCTTTTAGCC CTAGAGGTTG AAAAAAACCG CCACCAACAA
GATTATTCCC GAAAACTAGA ACATGAAGTT CAAATACGCA CGAATGAATT AGCGCAAAAA
AAAGAGGAGG CTGAAGAAGC CAATACAGCT AAAACACGAT TTATTGCCGC AGCAAGTCAC
GACCTTAAAC ATCCTATAGG CTTAATTAGG CTTCAATTAG AACAAATTGA AGATAATAAG
CTTAGTTATA AGATTAATAC GAGCCTCAGT TTTCTTGAGC AATTGGTTTC ATCCATTGTT
GAATTGTCAC GACTAGATGC CAGAGTATTA GTACCGCAAA TCTCATCTTT TGATCTGGGT
ATATTTATTG CTAAGGTTGC CGAAGAGCAC TTAACTTTGG CACAGAGTTT TCGACTTAAT
CTTATGACTG ATATTAAATC GGATGTTTGG GTTGCTAGTG ATTCACTGCT TCTTCGACGT
GTAATTGATA ACATATTGAG TAATGCCATA AAAATAAGTG ACCCAGATAC CAGTGTGAGT
TTAAGTGTTT GCCAAGAACG GCAACATGCA GTCATAGAAG TAATCGATCA AGGACCAGGA
ATGACTCAGC AGATGCAAGC TGAGTTATTT ACCCCTTTTA AACGTTGGAC TAGCCGCTAT
CAAGGGTCAG GTTTAGGGCT TTCAGTTGTG AAAGGTATTG CAGATTTATT AGGGATCTCG
CTTTCAATAC GTTCCACTTT AGGGGAAGGA ACACAATTTA CCTTGAAATT GCCATTGATT
GATAAGCCTA CTTTTAGTCA TATTGAAGAT GAGGCTGCAA TATTTCACTT AGGTATTGTT
GAAGATGACT ATGAGCAACT CAATCATCTG TGCTCGTCAC TCATGGTACG TGGCATAAAA
GTAAGTGGTT ACCGACATGC GATATCATTA CTACAGGATA AAACCGCTAT CTTTGATGCA
ATTCTATCTG ACATAGATAT AGGAACTGAG CAAGATGGAC TTGCATACTT AGTTGAGTAC
CGACAGCGCT TAACAGATGC TAAACCATTG ATTTACATGT CAGGTAATCC TGAAGCAGGA
CTCCGAATTC CGTCACAAAC AGATCTATTT TTCTTTTCTA AGCCCTTGAA ATTGGGTAAG
CTGATGTGGT TATTAAACCA GAGTAAAAGG AAATAA
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| Protein sequence | MVRSNVGSQC YQKRLTLMSR CYYLSIFLVF WSFIVSAQAK AAYYPLAQQI SSENGLSQNV
VLALEEDNYG RIWVGTQDGL NLINNNELLV FRRDQAEHRL SGTVITDLTL DQQGRLWVAS
DVGLDYIDTT TLESHVITLN QSISHMLLHT EQTIFYLSSQ KLYQFQINTG QVQEVKLPEL
FQIINTLGSY DEQHLLLIGP NGFGVLNLST GDVTPLQPDI PAGTYKASTI SAERIWISQM
EQGLYSCNLQ GLDCRTYSKA NQKLPTNNIA QIYQQDTALF LATDKGIGRL DLITDKLEWI
YPHSQNNAYQ ASRIARNLIP AKSGDIFVGT FNGLYRIPNT YKEVQAFNTG IGGYPSNQLA
VNKVMLNGQE RLVIAQPDKL TLWTLDASIL RLYREYDYPQ GFVPTNLFVD GGDIYLSSLT
NNNLILTPHN GAFTSLEERF AQLGNVQLFN MNQPQEDIRV FHLLTSMKVY QQRQNKWQLL
WEKPFLTGSA TAEYWQGRLY VASYQNGLMS ASMDNDWQKP QQWQQHHGLG IAINLFAQKD
KLYVLTANLG LFQVDSSSPI SITQVSSRDK LASQTLVCAI RDHNGQLILS SHKGLVIFDS
QQESLIYLSS LQGTHEQEFS QFSCGTLNNV PYFAGERGLT LVFDSQAIKS PAPQITWTHL
DVDGLTYRLG SSGTGKLTAP EFIRLHFVAT PSDLPKQASY RYRIKSLSDE WVELKSSFIP
MINLRPGSYQ VELESRDFSG RSSPIALATL EIAPGFWESS LAISLYIFIG LVVIALLVSH
RIKADRSLLA LEVEKNRHQQ DYSRKLEHEV QIRTNELAQK KEEAEEANTA KTRFIAAASH
DLKHPIGLIR LQLEQIEDNK LSYKINTSLS FLEQLVSSIV ELSRLDARVL VPQISSFDLG
IFIAKVAEEH LTLAQSFRLN LMTDIKSDVW VASDSLLLRR VIDNILSNAI KISDPDTSVS
LSVCQERQHA VIEVIDQGPG MTQQMQAELF TPFKRWTSRY QGSGLGLSVV KGIADLLGIS
LSIRSTLGEG TQFTLKLPLI DKPTFSHIED EAAIFHLGIV EDDYEQLNHL CSSLMVRGIK
VSGYRHAISL LQDKTAIFDA ILSDIDIGTE QDGLAYLVEY RQRLTDAKPL IYMSGNPEAG
LRIPSQTDLF FFSKPLKLGK LMWLLNQSKR K
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