| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3278 |
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| Symbol | |
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| ID | 1170971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3417827 |
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| End bp | 3418951 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345094 |
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| Product | hypothetical protein |
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| Protein accession | NP_718832 |
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| Protein GI | 24374789 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATAG CTGCCCGACG TTCTTGGCGT GAATTCGCCC TTTGTGTGAT TGCCGCGACC
ACCTTAACCG CCTGCCAAAA AGAAGTCACT GAGCATGCCA CCACAGCTCA GTTACAAAAT
GTCATCACCG CGCCTTTACG CTTATCGCCA AGTTATCAAA GTGAGCAAGT GTTCACTGGC
ACCATTCGCG CTGGTAACAC GACAGGGGTT GGCTTTGAAC TATCAGGAAA ATTAAGTGAA
CTGAATGTCG ATAGTGGAGC CAACGTCCAC CAAGGGCAGG TTTTAGCCAA ACTTGATACT
CGCTTGCTTG AAGCCGAGCG CCAAGAAATC CAAGCAAGCT TAGCGCAAAC TCAAGCTGAT
GTTGACCTTG CCACAAGCAC GCTTAAGCGT AATCTAGAAC TGAAAAAATC CGGTTATGTC
TCAGAACAAT TGCTCGATGA AACTCAAACC CAACTCGCCA GCCTAGAAGC GGCTAAAAAA
CGCCTGCTCG CCTCGCAGCA TGCCAATCAA CTTAAACTCG ACAAATCACA CTTACTCGCC
CCCTTTGATG GCATCATCAG TCAGCGCCAA CATAATTTAG GGGAAGTGGT TGCCGCGGGT
AGCCCAGCCT TTACCTTAGT TGGCAGTATG AATACCGAGG CCTATATCGG TGTTCCCGTC
GCCATTGCTA ACCAATTCTC CACTGGCCAA AATGTCAAGG TTAGTGTACA TAATCAGCCA
TTTACGGCAA AAATTGCGGG AATGAGTGCC GAAGTAAATC CCATTAGCCG CACTGTTCAA
TTGCGGATCA GTCTACCTGA ACACGCCAAA GTGATTAATG GGGAAATAGC CTATTTACAT
CAACAACAAA CCGTTGAACA AGCGGGTTAT TGGGTACCGA TTTCAGCACT GATTGATGGT
ATTCGAGGGC GCTGGAATAT CTATGTGGCG GCTCAAAATT CAACAACCAA ATCGTCAGAT
ATCACTCAAC GCCACATCGA GCGACGCGAT GTCGATATCC TCTACACCAC GCAGGATATG
GCTTATATCC AAGGTGCTAT TAAAGGCGAC GAACACTATG TGACTCAAGG TCTACATAAG
TTAGTCGTTG GCCAAGCCGT TTCCACACTC GCGACGACGA GGTAA
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| Protein sequence | MDIAARRSWR EFALCVIAAT TLTACQKEVT EHATTAQLQN VITAPLRLSP SYQSEQVFTG
TIRAGNTTGV GFELSGKLSE LNVDSGANVH QGQVLAKLDT RLLEAERQEI QASLAQTQAD
VDLATSTLKR NLELKKSGYV SEQLLDETQT QLASLEAAKK RLLASQHANQ LKLDKSHLLA
PFDGIISQRQ HNLGEVVAAG SPAFTLVGSM NTEAYIGVPV AIANQFSTGQ NVKVSVHNQP
FTAKIAGMSA EVNPISRTVQ LRISLPEHAK VINGEIAYLH QQQTVEQAGY WVPISALIDG
IRGRWNIYVA AQNSTTKSSD ITQRHIERRD VDILYTTQDM AYIQGAIKGD EHYVTQGLHK
LVVGQAVSTL ATTR
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