Gene SO_3262 details

Gene Information

• Locus tag: SO_3262
• Symbol: ilvB
• ID: 1170955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3397800
• End bp: 3399545
• Gene Length: 1746 bp
• Protein Length: 581 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637345078
• Product: acetolactate synthase isozyme I, large subunit
• Protein accession: NP_718816
• Protein GI: 24374773
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
• TIGRFAM ID: [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACGT CCCCAATTAC AGTAGTAGCA GATGCTATTA TTGAATTTTT AGCCCACCAA 
GGGATTAAAG CATTTCACAA TTATCCCGGT GGAACCATCG CTCCTTTATT AGATGCTTGC 
AAACGTTTCG GAGTAACCGT TTACACTTCT CGAAATGAGC AAGGCGCCGG TTATGCCGCG 
CTGGCTCAAG GCAAACTAAC CCAATTACCA GGTATCGTGG CGGTAACATC AGGCCCGGGT 
GTAACCAATG TATTAACGCC CGTCGCCGAT GCCTATTTTG ATGGTATTCC GATGTTAGTA 
TTTACGGGCC AAGTGGGTAC TGGCGACCTC ACAGGCCAAA AACGAGTAAG ACAATCTGGA 
TTCCAAGAAG TTGATACCCC ATCATTGATG AAACCTATCA CTAAGGGACA ATTCCAACCT 
AAAAACAGTG AAGAACTATA CGCTATTCTT CCTATCGCAT GGCAACTGGC TTTAGAAGGC 
AGAAAAGGCC CAGTTTCGAT TGATTTACCA ATGGACGTTC AACGCAGTGC AGCAATTAAA 
TCCATCAAAG TACCCGAAAT AGTTACTTAT CCTGTCAATC GCACAGAGCT AGGCACTTTT 
ATCGATGAGC TAATCAATGC CATTGACCAT TCGCAAAAAC CAGTGATTAT TTGCGGCAAT 
GGTATGACAT CACCAGCATT AGTGGATGCA ATCCGTACCT TAAGAAACTA CTGGCCTGCA 
CCTGTGAGCC ATAGCTTGCT GGGCGTTGGA GTTTTGGACA CCGATGATTC TGGGTCATTA 
GGGTTTCATG GCCATACAGG TAGCCAATTA GCAGGTAAAG CCATTGCTGA GTGTGATTTA 
TTACTGGTAT TAGGTTCCAG ATTAGATGTT CGCCAAACTG GCACACTGAA AACAGCCTTT 
GCCTCCAATG CGAAAATTTT TAGAGTCGAT TTAGATATTG GAGAATTAAC TGATAGTCGT 
ATCGCTCACC ATAAGGCTGT TCAAGCTGAA CTTGAGCAAT TTTTTGATGC CTTACACCCC 
AAATTTGCTC AATTATCACC ACCTAATCTA TCATCATGGC ATAACACCAT TTCGCAGTGG 
AAAGCGCAAT TAGCTTGGCC CTACCCAGAT TATCCAGGAA TTGCACCTAA ACTCTTGCTA 
GAAAAACTAA GCAACTCTTT ACCAGAGAAC ACTATCGTCA CCACAGGTGT TGGCGCACAT 
CAACATTGGG TTGCAAGGCA TTTTAGATTT GCCCTCCCCC ATCGCCAGCT TTTTACCTCG 
GCAGGCCATG GCACCATGGG CTATGATCTC CCGACAGCGA TAGGTGCCGC AATCCACTCA 
CCAGAGTCCA CCATTTTGTG TATCGCTGGA GACGGTTCAT TTCAAATGAA TATCCAAGAA 
CTGGGCGTGA TCAAGGAGTT AGGCCTTAAG ATCAAAATAC TGGTTCTGGA TAACCACAGA 
TTAGGCTTAG TATCTCAATT CCAATTAATG AATTGGGAAA CTGATACTGC TTGCGGTAAC 
AAACAATCGC CTAATTTTGC CTTAATAGCT CAAGGTTACG GCATTAAAGC ATTGCATTGT 
AGTGATAGCG CTAAACTAGA ACAAACATTG GCTGAATTTA TTGAGACCGA TGAATCTATT 
CTGCTTCATA TCGAAATTGC CACACAGCAT GATGTCCTCC CAATGCTATT AGGGGGTCAA 
ACAACAGATA AAATGTGGCC TTACTTTGAC ATGCAAGGTA ATCCAAGGGA TCCATCAAAT 
GTCTAA 

 

Protein sequence

MSTSPITVVA DAIIEFLAHQ GIKAFHNYPG GTIAPLLDAC KRFGVTVYTS RNEQGAGYAA 
LAQGKLTQLP GIVAVTSGPG VTNVLTPVAD AYFDGIPMLV FTGQVGTGDL TGQKRVRQSG 
FQEVDTPSLM KPITKGQFQP KNSEELYAIL PIAWQLALEG RKGPVSIDLP MDVQRSAAIK 
SIKVPEIVTY PVNRTELGTF IDELINAIDH SQKPVIICGN GMTSPALVDA IRTLRNYWPA 
PVSHSLLGVG VLDTDDSGSL GFHGHTGSQL AGKAIAECDL LLVLGSRLDV RQTGTLKTAF 
ASNAKIFRVD LDIGELTDSR IAHHKAVQAE LEQFFDALHP KFAQLSPPNL SSWHNTISQW 
KAQLAWPYPD YPGIAPKLLL EKLSNSLPEN TIVTTGVGAH QHWVARHFRF ALPHRQLFTS 
AGHGTMGYDL PTAIGAAIHS PESTILCIAG DGSFQMNIQE LGVIKELGLK IKILVLDNHR 
LGLVSQFQLM NWETDTACGN KQSPNFALIA QGYGIKALHC SDSAKLEQTL AEFIETDESI 
LLHIEIATQH DVLPMLLGGQ TTDKMWPYFD MQGNPRDPSN V