Gene SO_3183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3183 
Symbol 
ID1170877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3321791 
End bp3322741 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content31% 
IMG OID637345000 
Productperosamine synthetase-related protein 
Protein accessionNP_718739 
Protein GI24374696 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCA AGTCAGCTTC AGATGTGTCT AACTGTAAAT ATTCATATTT ATTTACAAAA 
AATGCCAGAA CCTCTTGGTT TAAAACGCTA GATGCACTTA GTGTTTATAA AAATAAAAAA 
TTAACTTTAC TTTTACCGGC GTATATTGGT ATTAATGAGA AAGAAGGCTC TGGTGTTTTT 
GATGCGGTTA TAAAAAATGG AGCTGACGTA GTATTTTATA GGGTTACCGA TAATTTACAG 
GTTGATATCA GTGATTTTAA TAATAAATTA AAGAGTAATG ATATTGATGT TGTGCTTGTG 
ATTCATTATT TTGGGTTTTC TAGAGTTGAT ATGGACTCAA TTCGTACCAT ATGTGAAAAA 
CTCAATGCTA TTTTGGTCGA AGACTGTGCG CACGCTTTCT ATATAAACGC TGATAACAGT 
AAAATTGGTA ATTACGGTGA TTACAGCTTT TATTCATTAC ATAAATATTT AGCAACCTCG 
ACAGGTGGAA TGTTAAAAAT AAACAATACT TCATTACCTA ATCCTGTTCT AGACATAAAT 
GACAAAATAG ATTTTGATGC ACTAGAAAAA TTTGCAAGTT CAGATTTCAA AAAAATAGCT 
ACTATAAGGC ACCGTAATTA TTTAGCTTAC GAAGAACATC TCGCAACCGA TAAAAACATT 
GATGTGCTTT TTAAGTTAGA AAGTACAGAT ATACCGCAGA CATTTGCTAT AAGAGTAAAA 
AATGGATTAA GAGAGAAACT TTATTTTTAC TTACTGGAAA AAGATGTGCC AACAGTCGCA 
CTGTACTACA GATTGATCCC GCAAATTACA GAAAATGAAT TCCCAAATTC ACTTTTAATT 
TCAAATGAGA TTCTGAATCT ACCGGTTCAC CAAGACACGA AAATAAGTGA AGTTGTGTAC 
ATATGTGAAA AAATAAAAGA ATTCTTTTCA AATGAACAAA ATAGAAATTA A
 
Protein sequence
MITKSASDVS NCKYSYLFTK NARTSWFKTL DALSVYKNKK LTLLLPAYIG INEKEGSGVF 
DAVIKNGADV VFYRVTDNLQ VDISDFNNKL KSNDIDVVLV IHYFGFSRVD MDSIRTICEK 
LNAILVEDCA HAFYINADNS KIGNYGDYSF YSLHKYLATS TGGMLKINNT SLPNPVLDIN 
DKIDFDALEK FASSDFKKIA TIRHRNYLAY EEHLATDKNI DVLFKLESTD IPQTFAIRVK 
NGLREKLYFY LLEKDVPTVA LYYRLIPQIT ENEFPNSLLI SNEILNLPVH QDTKISEVVY 
ICEKIKEFFS NEQNRN