Gene SO_3158 details

Gene Information

• Locus tag: SO_3158
• ID: 1170852
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3294364
• End bp: 3295149
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637344975
• Product: polysaccharide synthesis-related protein
• Protein accession: NP_718714
• Protein GI: 24374671

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATCTT ATTTTACCCC ATTGGCACTG CTAGTAGGTT CACTGTTTTT GCCCACCGTA 
GAAGCCAATA CCCAGCTTTC TGTCAGTACC TCAGCGTCTA ACACGCCGCA GCTACAAATT 
ACCTATCCGA CTGCGATTCG AGTAGGGCAA GCGGTCCAGG ATGGGTTAAC CCAGCTTCCT 
TTTTATAATC AAACGATAAA AAATGAGGCG GTTTCAATTT ATTGGCTAGG AGCAGCCCTA 
TTAGATACAA AAAATACCGC TGTGTTAGAA GTCACTCGCC AGCAAGTATT GCAACAATTA 
GCTGACATGG GAGAGCAGGT CGATAATAGT CAATATATTG CTAAACTTGC AAAATTTGCC 
CAATTTTTAC GTAACATCAA ACTAGGCCAG CGAGTTAACC AGCCATTAGA CCTCGATTTA 
ATTCGGATTA CCGATGCTTA TAATCCGGTT ATTGATGGTG ATTTTTTACT GGTGCTACCG 
CCTCGACCTA CTACAGTTTC AGTCGTTGGC GCAGTCGCGC AAACGGGTGA GCAAACATGG 
CTATCCCAGG CAAGCAGTAA AGATTACATA AACCAAGCGG GTTTACTCGA TAATGCCGAA 
AATAGCTTTG TGTGGATTAT TCAACCCGAT GGCAATGCGA TAAAACAGCC TATCGCCTAT 
TGGAATCATC AAGCTCAAGA TATCGCCCCT GGTGCAATAC TCTTTGTGGA GTTTACGGCA 
CTGTTTGATG ACCATACCGA ATTAAATAAC AATATTATTG AATTACTCAA AAATCGGGCT 
CTGTAA 

 

Protein sequence

MRSYFTPLAL LVGSLFLPTV EANTQLSVST SASNTPQLQI TYPTAIRVGQ AVQDGLTQLP 
FYNQTIKNEA VSIYWLGAAL LDTKNTAVLE VTRQQVLQQL ADMGEQVDNS QYIAKLAKFA 
QFLRNIKLGQ RVNQPLDLDL IRITDAYNPV IDGDFLLVLP PRPTTVSVVG AVAQTGEQTW 
LSQASSKDYI NQAGLLDNAE NSFVWIIQPD GNAIKQPIAY WNHQAQDIAP GAILFVEFTA 
LFDDHTELNN NIIELLKNRA L