| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3149 |
|---|
| Symbol | |
|---|
| ID | 1170843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 3286405 |
|---|
| End bp | 3287691 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637344966 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_718705 |
|---|
| Protein GI | 24374662 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACT TACCCACCAC CTTGCTACTG TCTACGCTGG CCATCACTTT ATCAGCGCAG
GCGCATAACT TGGTCCCGGC CCCCAAACAA ACCCAGAGTG TACTGATTAA AAACGCCACT
GTGCATACGG TCATCCAAGG GGTATTAACC AATACCGATG TGTTGATTGA AAACGGTAAA
ATCAGTGCGC TGGGGCCACA GTTAAGCACT AATACGACTG CATCAACTCA AGTTGTTGAT
GCCAGCGGTA AACACTTATA TCCCGGCCTT ATTGCACTGG ATACCAGTCT TGGTTTAGTG
GAAATCGAGA TGGTGCGTCC AACCGTCGAT AACGCTGAAG TGGGTGATGT TAATCCGCAA
ATAAGTGCGG CGAGTGCCTA TAACCCAGAC TCAGAGCTAC TGCCGACCAT TCGCTACAAT
GGCATCACCC ATGCACAAAT CGTCCCCAGT GGCGATGGGC TAGCGGGGCA ATCCGTGGTA
GTTGACCTTG ATGCGTGGAC AATTGAAGAC GCCCTTCAAC CCAATGAAGG GCAATTCCAT
GTCTACTGGC CGCAAATAAA GCGTATGCCC GAGGATGAAA AGGAAAAAGC CAAAGCCATT
GAGAAAAATC AGCAAGCTAT CGATAAACTC ATCACCGCCT TTGAGGATGG CTACCGCTAT
TTCTTAAGCC AAAATGCACA GGATACGGAT AACTGGCCTA ATCTGCGTTG GCAGGCCATG
CTGCCACTGT ATCAAGGTAA AGCCACACTT TTTGCCCATG CGGACAGCGT CAGCCAAATC
GAGCAAGTGA TTGCCCTGAC AAAAAAATAT CAATTTAAAT TGGTGATTGT CGGTGGTTAT
GATGCATGGC GATTGGCTTC AAGTTTAAGG GAAGTGAACG CCAGTGTGAT TTATCCGCAC
ACCTTAAGCC TGCCTAAACG TAAAGATGAA CCCGTGGATT TGCCGTTTAA AATCCCTTCG
TTGCTAGCAA ATGCTGGCAT TCCCTATGCC CTTGGTTTTT CATCGGATTG GAACAGCCGT
AACCTCCCCT ACGCCGCTGG TTACAGTGCC GCTTATGGCG TTACGCCCGA GCAAGCGTTG
AAATCAGTCA CCCTAGATGC GGCAAAGCTG TTAGGGATTG CCGATTTAGG CGCCATTGCC
GTAGGTTATC AGGGCAGCGT TGTCCTCAGT GACGGAGATA TTCTCGATCC CATGAGCAGC
AAAATTGATG CGATTTGGAT AGAGGGGCGG CAAATAGATC TGAATAATCG CCACCAGCAG
CTTTATCAAA AGTATCTTAA GCGATAG
|
|---|
| Protein sequence | MKHLPTTLLL STLAITLSAQ AHNLVPAPKQ TQSVLIKNAT VHTVIQGVLT NTDVLIENGK
ISALGPQLST NTTASTQVVD ASGKHLYPGL IALDTSLGLV EIEMVRPTVD NAEVGDVNPQ
ISAASAYNPD SELLPTIRYN GITHAQIVPS GDGLAGQSVV VDLDAWTIED ALQPNEGQFH
VYWPQIKRMP EDEKEKAKAI EKNQQAIDKL ITAFEDGYRY FLSQNAQDTD NWPNLRWQAM
LPLYQGKATL FAHADSVSQI EQVIALTKKY QFKLVIVGGY DAWRLASSLR EVNASVIYPH
TLSLPKRKDE PVDLPFKIPS LLANAGIPYA LGFSSDWNSR NLPYAAGYSA AYGVTPEQAL
KSVTLDAAKL LGIADLGAIA VGYQGSVVLS DGDILDPMSS KIDAIWIEGR QIDLNNRHQQ
LYQKYLKR
|
|---|
| |