Gene SO_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3065 
Symbol 
ID1170751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3181909 
End bp3182397 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content44% 
IMG OID637344870 
Productcolicin V production protein 
Protein accessionNP_718630 
Protein GI24374587 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTGGA TTGATTACGC TATTATTTTC GTTATCGGGT TATCGACTCT TATCAGTCTG 
ATCCGTGGAT TCGCCAAAGA AGCCATGTCG TTAGTGGTAT GGTTCGCGGC TTTCTTTGTT 
GCCAGCCAAT TTTACCAAGA CCTCGCCATC CATCTGACAC AAATGAACGA TGAGATGCTG 
CGCAACGGCG TTTCTATTGC CATTCTTTTT ATCACCACCT TAATTCTCGG CGCCCTTATT 
AATTACATCA TTGGGCAATT AGTGGTTAAA ACCGGATTAT CAGGCACTGA CAGACTGTTA 
GGTCTGTGTT TCGGTGCCAT AAGGGGCGCG CTGATTGTCA GCGCGCTACT GTTTTTTATG 
GATGCTTTTA CAGGCTCACC CAACGCCCAA TGGTGGAAGG ATTCTGTATT AGTGCCCGAA 
TTTGGCGTTG TCATCCAATG GTTTTTTAAC TATTTGGAAA ACACCTCCAG CTTTGTACCC 
AAACTATAA
 
Protein sequence
MVWIDYAIIF VIGLSTLISL IRGFAKEAMS LVVWFAAFFV ASQFYQDLAI HLTQMNDEML 
RNGVSIAILF ITTLILGALI NYIIGQLVVK TGLSGTDRLL GLCFGAIRGA LIVSALLFFM 
DAFTGSPNAQ WWKDSVLVPE FGVVIQWFFN YLENTSSFVP KL