| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3024 |
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| Symbol | trpA |
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| ID | 1170711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3136062 |
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| End bp | 3136898 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637344833 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | NP_718592 |
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| Protein GI | 24374549 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCA TTTCAAACCA AACTATCCCT CATCAAGCCA GCCGTTATCA AGCAGCGTTT
AGCCGTTTAA AAGCCGAAGG CCGTGGCGCC TTTGTGCCCT TTGTCACCTT AGGCGATCCA
AGCCCTGAGC TGTCACTTAA GATTATCGAC ACCCTAGTGC AAAACGGTGC CGATGCGCTG
GAGTTAGGCT TTCCTTTCTC TGATCCGCTC GCCGATGGCC CCGTGATCCA AGGCGCAAAC
CTCAGAGCCT TAGCCGCTGG CACAACGCCA ACAGCCTGCT TTGAATTGCT GGCCAAGATC
CGCGCTAAAT ACCCTGAACT TCCCATAGGT TTATTACTGT ATGCGAACCT CGTATTCGCC
AATGGGATCG ATGCTTTTTA TGCTAAAGCG CAGCAAGCGG GCGTGGATTC AGTGTTAATT
GCCGATGTGC CAGTTGAAGA AGCCGCGCCT TTTATTCAAG CTGCCAAAGC CCATGGCATT
GCGCCAATTT TTATTGCGCC GCCCAATGCC GACAGCGACA CCCTTGCGAA GGTCAGCCAA
AGTGGTGAAG GTTATACTTA TTTGCTGTCG CGCGCTGGCG TAACGGGTGC CGACACTAAA
GCAGGTACGC CTGTCGAAGA GATATTAGCC AAATTACAAG AGTTTAATGC CCCGCCGCCG
CTGTTAGGCT TTGGGATTGC AGAGCCTGCC CAGGTGAGCG CCGCCATCAA AGCGGGCGCT
GCAGGCGCAA TCTCTGGCTC TGCGGTGGTG AAAATTATCG AAACTCATCA ACAGGATGAA
GTGAAACTGC TCGCAGCATT AGGCGAATTT ACCCGCACAA TGAAAGCGGC AACCTAA
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| Protein sequence | MNSISNQTIP HQASRYQAAF SRLKAEGRGA FVPFVTLGDP SPELSLKIID TLVQNGADAL
ELGFPFSDPL ADGPVIQGAN LRALAAGTTP TACFELLAKI RAKYPELPIG LLLYANLVFA
NGIDAFYAKA QQAGVDSVLI ADVPVEEAAP FIQAAKAHGI APIFIAPPNA DSDTLAKVSQ
SGEGYTYLLS RAGVTGADTK AGTPVEEILA KLQEFNAPPP LLGFGIAEPA QVSAAIKAGA
AGAISGSAVV KIIETHQQDE VKLLAALGEF TRTMKAAT
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