| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3022 |
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| Symbol | trpC/F |
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| ID | 1170709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3133337 |
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| End bp | 3134746 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344831 |
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| Product | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase |
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| Protein accession | NP_718590 |
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| Protein GI | 24374547 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase
[COG0135] Phosphoribosylanthranilate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCA GTACCACCCA GGCGAATGTC TTAACCCGTA TTGTCGACAC TAAAGCCGCC
CATATTGCAG CCCTTAAACT GCGTTTTCCT GAGGCAAGCT TAGTCCCCAA AGTCTCTGAC
CGAAGCCTAT TTGCCGCCCT CAAAGCGCCG AAGGCGGGTT ATATTTTAGA ATGCAAAAAA
GCCAGCCCCT CCAAAGGGTT AATCCGTAAA GACTTTGATG TCGAAGCCAT CGCATCGATT
TATACAAAAT ATGCCGCGGG GATCTCGGTA TTAACCGATG AGCAATTTTT CCAAGGTGAT
ATGGACTATA TCCCTAAAGT GCGAGCAAAA GTGAGCCAAC CGATTCTGTG TAAAGACTTT
TTTGTTGATG AGTACCAAGT CAAATTGGCT GCCCATCAAG GCGCCGATGC GATTCTGTTA
ATGCTCTCTG TGCTCGATGA TGAGCGATAC CAGCAACTTG CCAGCGAAGC GGCCAAGTAT
CAACTCGATG TACTGACAGA GATCAGCAAT GAAGAAGAAC TTAAGCGCGC CATCGCCTTG
AATGCACCGA TTATTGGCAT TAATAACCGT AACTTACGAG ATTTAAGTAC CGATCTTGCC
ACCACTGAGG CCTTAGCGCC CCATATTGGC AGTGATCGCG TGGTTATCAG CGAATCGGGT
ATTTACACTA ACGATCAAGT GCGTCGCTTA AGCCCACTGG TCGATGGCTT CTTGGTAGGT
AGCTCAATTA TGGCCGAAGA AGATATTGAT TTAGCCTGTC GTAAATTGAT CTTCGGTCAC
AATAAAGTCT GCGGCCTCAC TCGCCTTGAG GATATTGAAG CGGCGGCCAA TGCGGGCGCC
GTTTATGCAG GACTCATTTT TGCTGAAAAA TCACCACGCG CACTCACAAA AGATGCCGCC
AAACAGTTAG TCGAGCAATA CCGCGCAGCC AAATTGCCCG CCATTGAATT TGTTGGGGTA
TTTGTTAACA ACACGCCTAA GCTAATCGCA AGTATTGCCA AAGCATGTGA TTTGGCCGCA
GTGCAACTGC ACGGCAGTGA AACCGAGTTA GAAATTACTG AGCTGAGCCA ATTGTTACAA
CAAGCAGGAC TTAAGACTCA CATTTGGAAA GCGGTCAGTG TTGACGCCAC CAGCGGCGAA
CTCGGTGCCA TGCCAAAAGG AGTACAGCGT TATCTGTTTG ATAGTAAAAA TAATGCAGGG
TTTGGTGGCA CGGGGCAGCC CTTTAATTGG CACTTACCTC TTGCCCATAA AGCAAAAGCC
TTACTGGCGG GCGGTCTTAA TGCAGCTAAT GCCGCCAACG CGAATGCCCA AGGATTTTAC
GGTTTAGATT TTAATTCCGG CCTCGAAACC GCCCCCGGCA TTAAATCTGC AGAACAGATC
CAAACAGCCT TTGCCCAATT AAGGCTCTGA
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| Protein sequence | MQTSTTQANV LTRIVDTKAA HIAALKLRFP EASLVPKVSD RSLFAALKAP KAGYILECKK
ASPSKGLIRK DFDVEAIASI YTKYAAGISV LTDEQFFQGD MDYIPKVRAK VSQPILCKDF
FVDEYQVKLA AHQGADAILL MLSVLDDERY QQLASEAAKY QLDVLTEISN EEELKRAIAL
NAPIIGINNR NLRDLSTDLA TTEALAPHIG SDRVVISESG IYTNDQVRRL SPLVDGFLVG
SSIMAEEDID LACRKLIFGH NKVCGLTRLE DIEAAANAGA VYAGLIFAEK SPRALTKDAA
KQLVEQYRAA KLPAIEFVGV FVNNTPKLIA SIAKACDLAA VQLHGSETEL EITELSQLLQ
QAGLKTHIWK AVSVDATSGE LGAMPKGVQR YLFDSKNNAG FGGTGQPFNW HLPLAHKAKA
LLAGGLNAAN AANANAQGFY GLDFNSGLET APGIKSAEQI QTAFAQLRL
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