Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3021 |
Symbol | trpD |
ID | 1170708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3132201 |
End bp | 3133244 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637344830 |
Product | anthranilate phosphoribosyltransferase |
Protein accession | NP_718589 |
Protein GI | 24374546 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGAGA CATCAATCCA GCCCCTGCTC GATATTTTAT TCCAAGGTAA AGCATTGACC CGTGAGCAAA CCGCCAGCCT CTTTAGCGTG CTGATCCAAG GAGAAATGAA TGAGACAGTG ATGGCGGGCA TGTTAATGGC GCTTAAAATT CGTGGCGAAA CCATAGAAGA AATCAGCGGT GCCGCCGACG CCATGCGTGC AGCCGCTAAA CCTTTCCCTT ATCCCGAATC AAGCCGCTCC CAAGGGGTTA TCGATATTGT CGGTACCGGT GGCGATGGGT TTAATACCAT TAATATTTCT ACCACTGCCG CCTTCGTCGC CGCAGCCGCT GGCGCAAAAG TGGCGAAACA CGGTAATCGC TCGGTATCGA GCAAGTCGGG CTCGTCAGAT TTACTCGCCC AATTTGGCAT CGATTTAACC ATGTCACCTG AACTTGCGAG CCACTGCCTT GAGGCGCTCA ATCTCTGTTT TCTGTTCGCA CCCCACTACC ATGGCGGTGT AAAGCATGCA GTTCCCGTCA GACAAACACT CAAAACCCGC ACATTATTCA ATGTGTTAGG ACCATTGATT AACCCCGCAC GCCCAGAGTT TATGTTACTT GGCGTATACA GTGCAGAACT TGTCACTCCT ATCGCCCGCG TACTGCAAGC CCTTGGCACT CAAAGAGCCA TGGTGGTACA TGGTAGCGGT TTAGATGAAG TGGCGCTCCA TGGCAGCACA CAGGTCGCCG AACTTAAAGA CGGTGAGATT ATTGAATATC AATTAACGCC TGCCGATTTT GGTGTCCCTC AAGCCCACAT TAGTGAGCTT GAAGGCGGAG AGCCTGCCCA CAACGCCCTG ATCACCCAAC AGATTTTACA AGGACACGGC TGCGATGCCC ACACCCACGC GGTTGCCATC AATGCGGGTT GTGCCTTATA TCTATGTGGC TTGTCGGAGT CCGTAAAAAT GGGGACCGCC CTTGCGCTCA GCACCATAAA AACCGGTAAA GCCTATGAAT TACTGCATAA GCTCGCTACA GTCAGTAGCC AATCACAGGA ATAA
|
Protein sequence | MSETSIQPLL DILFQGKALT REQTASLFSV LIQGEMNETV MAGMLMALKI RGETIEEISG AADAMRAAAK PFPYPESSRS QGVIDIVGTG GDGFNTINIS TTAAFVAAAA GAKVAKHGNR SVSSKSGSSD LLAQFGIDLT MSPELASHCL EALNLCFLFA PHYHGGVKHA VPVRQTLKTR TLFNVLGPLI NPARPEFMLL GVYSAELVTP IARVLQALGT QRAMVVHGSG LDEVALHGST QVAELKDGEI IEYQLTPADF GVPQAHISEL EGGEPAHNAL ITQQILQGHG CDAHTHAVAI NAGCALYLCG LSESVKMGTA LALSTIKTGK AYELLHKLAT VSSQSQE
|
| |