Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3016 |
Symbol | |
ID | 1170704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3128009 |
End bp | 3128629 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637344826 |
Product | Sua5/YciO/YrdC/YwlC family protein |
Protein accession | NP_718584 |
Protein GI | 24374541 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGT TTTTTTATGT ACACGAAGTA AATCCACAGG CGCGTTTGAT TAGTCAAGCC GTGGCTGTGC TTAAGTCCGG CGGCGTCATT GTGTATCCAA CCGATTCGGG TTATGCCCTC GGTTGCATGA TCGGTGAGAA AGACGCGATG ACGCGTATTA CCCGCATTCG TCAAATCGAA CACGATCATA ATTTCTCCTT AATGTGCCGT GACTTATCTG AGCTTGCGAC CTATGCCAAG GTGGATAATC AGGCCTATCG CATCTTAAAA AGTTGCACGC CAGGGCCGTA CACTTTTATT TTTAAGGCGA GCAAAGAAGT TCCCCGCCGT CTGCAAAATG ACAAGAAGAA AACCATTGGT ATCCGCGTGC CAGACAACGT CATCGCCTTA GCTTTGCTCG AAGCCTTAGA CGCGCCGTTG ATGTCGACCA GTTTAGTGAT GCCAGATGCA GAATTTGCTG AGTCTGATCC TGAACAGATC CGCGATTTGT TAGAGCATCA AGTGGATGTG ATTATTCACG GCGGTTATTT AGGTGAAAAG CCAACCACAG TGATTGATAT GTCGGAAGAT GGTTTCGAAG TGCTGCGCGA AGGGGCAGGA GATGTCACTC CGTTTCTGTA A
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Protein sequence | MSQFFYVHEV NPQARLISQA VAVLKSGGVI VYPTDSGYAL GCMIGEKDAM TRITRIRQIE HDHNFSLMCR DLSELATYAK VDNQAYRILK SCTPGPYTFI FKASKEVPRR LQNDKKKTIG IRVPDNVIAL ALLEALDAPL MSTSLVMPDA EFAESDPEQI RDLLEHQVDV IIHGGYLGEK PTTVIDMSED GFEVLREGAG DVTPFL
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