Gene SO_2924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2924 
Symbol 
ID1170613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3056116 
End bp3056778 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID637344737 
Productsignal peptidase I family protein 
Protein accessionNP_718494 
Protein GI24374451 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAG GAATAAGAAT TTTGCTCAAG GATTACGGCT CTTTTTTGTT GTTTATCAGT 
TTAATGCTGG TGTTTAGGAG TGCTGTGGCT GATTGGAATA CGGTGCCTAC TGGTTCAATG 
TTACCAACCA TTGTTGAAGG CGATCGTATC CTCGTTAATA AGATGGCCTA CGATGTTAGA 
GTGCCATTTA CGCATATCGC GTTAGTCAAA CTGGCAGATC CTGTGCGTGG GGATATTGTC 
GTATTTGACT CAAAAAATGC GGATAAAAGG CTCATTAAGC GAGTCATAGC TGTCCCCGGA 
GATACCGTGA TGATGCGAGA TAATCGCTTG TATTTGAATG GTGAACCGCT TGCCTATAAG 
CCACAAGCAT TAAGTCCTTA TGCGCCAGCA GGTGTCGTTG AGATGCAAGA GGATTTACTT 
GGCATCATGC ACAGTATTCG CCTGAATCAG CTACCCTCAA AGCTTGCCAA TTTTGGACCT 
GTCACAGTGC CGGATGAGCA TTATTTGGCC CTGGGTGATA ATCGCGATAA CAGTGCAGAT 
TCTCGGGTAA TAGGCTTTGT GCCCCGAGAT GAAATTGTGG GCCGTTCAAG TTCGCTGGTT 
TTCTCACTGG ATTATGATAA TTATTACTTA CCGCGGCCAG AACGTTTAAT GCAAGATTTT 
TAA
 
Protein sequence
MFKGIRILLK DYGSFLLFIS LMLVFRSAVA DWNTVPTGSM LPTIVEGDRI LVNKMAYDVR 
VPFTHIALVK LADPVRGDIV VFDSKNADKR LIKRVIAVPG DTVMMRDNRL YLNGEPLAYK 
PQALSPYAPA GVVEMQEDLL GIMHSIRLNQ LPSKLANFGP VTVPDEHYLA LGDNRDNSAD 
SRVIGFVPRD EIVGRSSSLV FSLDYDNYYL PRPERLMQDF