Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2719 |
Symbol | deoD-3 |
ID | 1170418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 2837111 |
End bp | 2837815 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637344542 |
Product | purine nucleoside phosphorylase |
Protein accession | NP_718303 |
Protein GI | 24374260 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0813] Purine-nucleoside phosphorylase |
TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCTC ATATTAATGC TCAACCCACT GATTTTGCTG AAACTGTTAT TATGCCAGGC GATCCACTGC GGGCGAAATA TATCGCTGAA ACCTATCTTA CGGATGCCGT AGAAGTGACT AACGTTCGCA ATATGCTGGG TTACACAGGC TATTACCAAG GGCAACGTAT TTCGGTGATG GGCCATGGCA TGGGTATTTC ATCTATGGTG CTTTATGGTC ATGAGTTAAT TAATTTTTTT GGCGTGAAAC GCATTATTCG TATCGGTAGT TTAGGGGCGA CCCAACAGCA TGTCGAAATG CGCGATGTGA TTTTAGCTCA AGCCGCAGGC ACAGATTCCC CGACGAATGC TAAACGCAGC AGTGGCTACC ATATGGCGAC CTCAGCCACC TTTTCCTTAC TGCACAAAGC CTATACCAAA GCCAATGAAA AAGGCATTAG CGTGAAAGTT GGCAACGTAT TTAGTGGCGA TCTTTATTAT GATCCTGACG AAGATATGAT CCCTGCGCTT GAGCGTTTCG GGGTATTAGG TATTGATATG GAAGTGGCTG GACTTTATGG CTTAGCACAC CAACAGGGTA TTGAATCGTT AGCCATTCTG ACGGTGTCGG ACCACTGTTT AACGGGTGAA GAAACCACGG CGCAAGAGCG GCAGTTATCT TTCAATAATA TGATTGAACT CGCCTTAGAA ACCGCACTTA ATTAG
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Protein sequence | MTAHINAQPT DFAETVIMPG DPLRAKYIAE TYLTDAVEVT NVRNMLGYTG YYQGQRISVM GHGMGISSMV LYGHELINFF GVKRIIRIGS LGATQQHVEM RDVILAQAAG TDSPTNAKRS SGYHMATSAT FSLLHKAYTK ANEKGISVKV GNVFSGDLYY DPDEDMIPAL ERFGVLGIDM EVAGLYGLAH QQGIESLAIL TVSDHCLTGE ETTAQERQLS FNNMIELALE TALN
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