Gene SO_2700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2700 
Symbol 
ID1170401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp2818312 
End bp2818959 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID637344525 
Productprophage MuSo2, baseplate assembly protein V 
Protein accessionNP_718284 
Protein GI24374241 
COG category[S] Function unknown 
COG ID[COG4384] Mu-like prophage protein gp45 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAACTG AAACCTATAT AAATAAGCTG CTTGCACCTA TCCGACGCCG CATTACTGGC 
ATGCTCACCC GTGCCGTAGT GAGTGGCATT GTAGAAGACC TACAGCGGCA AAATCTGCAA 
GTAAAAATGC ACGCGGATGA ATCAGCAGAT AACATTGAGC GCTTTCAAAA CTATGGGATG 
AGTTCGTACC CGCCAGAGGG TGCGGAAGCC ATTGTTGCGG CATTGGGTGG CGCGTTATCT 
GGTTTAGTGG CAATTGCGGT TGAAGATAAA AAATTTAGGC CAAAGGGTGA AAGCGGTGAT 
GTTTTTCTAT ACCATCTTGA AGGGCATAAG ATACGCTTAA CCAAAGACGG CAAAATCATC 
CTCACCGCGC AGGATGTGAT CTTCGAAATC GAGAATTCCT TCACCATATC AACAACCGAC 
GTTATTTTTA ACGCCTCAGG TTCGTTCACT ATCATCTCAC CAGAAACATT AATCGACGGC 
CCGTTACACG TCACTGGTGA TATCTCAACT GACTTGGGAA TAACAGCAGT TAATGGCATT 
ACTTCAAACA GTGTGATCAC TGGTTCTGAT TTAAGCGCTA ATAACATTAG TTATCTAGGT 
CATATCCATA AAGACGCAGA GAACAGGCCG ACAACCGCAC CTGAATAG
 
Protein sequence
MVTETYINKL LAPIRRRITG MLTRAVVSGI VEDLQRQNLQ VKMHADESAD NIERFQNYGM 
SSYPPEGAEA IVAALGGALS GLVAIAVEDK KFRPKGESGD VFLYHLEGHK IRLTKDGKII 
LTAQDVIFEI ENSFTISTTD VIFNASGSFT IISPETLIDG PLHVTGDIST DLGITAVNGI 
TSNSVITGSD LSANNISYLG HIHKDAENRP TTAPE