Gene SO_2697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2697 
Symbol 
ID1170398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2814240 
End bp2815901 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content43% 
IMG OID637344522 
Producthypothetical protein 
Protein accessionNP_718281 
Protein GI24374238 
COG category[R] General function prediction only 
COG ID[COG3941] Mu-like prophage protein 
TIGRFAM ID[TIGR02675] tape measure domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAA AGCTTGTTAC CGATATTGTA TTAAACCTAT CGGGTAATTT ATCTGAAAAA 
GCCATTCGTT ACGGCGATCA AATAAAAAAT CTAGGCGAAA AGAGCAAAGT CGGGTTTGGG
ATGATTAGCT CTTCTGCCGC CGCCGCTAGC CGTGGCATTG ATACCTTTGG TAATAGAGCA
ATTTTAGGTG TTAGTGCTGG TGCGATAGCC TTTGAAAGAA CCTTTATCAA AACAGCTGCT
GAATTTGAGC GTTATCAAAT CATGCTTAAT AAGCTGCAAG GCTCTGAGGC CAACGGCTTA
AAAGCCATGG AATGGATCGA GAAGTTTACT CAAGAAACCC CTTACGGCGT AAACGAGGTG
ATGAACTCGT TTATTCGTTT AAAAGCATTT GGCTTAGACC CAATGGATGG CTCGCTGCAA
GCAATTGCTG ACCAAGCGGC AATGATGGGC GGTACCGCTG AAACGGTTGA TGGTATAGCG
CTAGCATTGG GGCAAGCTTG GACAAAGGGA AAATTACAAG GTGAAGAAGC ATTACAGTTA
TTAGAGCGCG GTGTTCCTGT TTGGGATTAT TTAATTAAAG CGAGTAAAGA TTTAGGTAAA
AATAATGGTG TTGGATATAC AGCAGCACAA TTACAAGATA TGGCATCTAA AGGATTACTG
ACTCGTGATG CTATTAAGTC GCTTATAAAA GAAATGGGTA GCGCTTCACA GGGTTCATCT
AAAAAACAAA TGGAATCATG GAATGGCATG ATTTCAAATA TGGGTGACGC TTGGACAATA
TTTAAAAAAG ATGTAATGAG TAGTGGCGCA TTTACTGTAT TAAAAACTGA ATTGGGCGGT
GTTTTAAAAC AATTAGATGA AATGAAGAAA ACAGGCGAGT ACGACAAGCT TGTTGAAAAA
GTAGGTAAGG ATTTAGTCGA AGGATTTAAA ACAGCAGCAG AAGCAGCTAG AGGTTTAAGG
GACGTAGGTC GTGATTTATT GCCCATTCTT AAGGCTATTG GTTCTGGCGC TTCGGCCATT
GCTGATGCTG TTGGTGGTTA TGAAAACTTA GCAAAGATTT TGTTATCTGT TTACATGCTA
AATAAAGCGC TACGAATCGG TGCTCCATTG TTAAAAGGTG CAATTGGTGC GGGTGGTTTT
GTATTTGATA AAGCGACAGG CGGTTTAGGT GGTAAAGGGA AAGGCGGTAT TTCTGACCTA
GGTGTAATGC CTGTTTATGT AGTCAATATG GGTGCGGGTG GTATGGGCGG TGGCTTACCT
GATGGTGTTG ATCCAACAGG TACTAAAAAG GGAGCGTCAA AAGCTTCCCG TATTTTTAAT
CTTCAAAATC TTGCGGCTCT AGGTACTGTT GGATATGCGG CCAATATGAC TTATCAAAAT
CCTGATGACT GGTTACCGTT TAATCTACGC CGTAAATCAG AGCTTGATCC TACGGCATTG
CATGGCATCC CCGCTGCACC TGGTCTGCTT GATGTGCTCG ATGACTTTAA AAGATGGTTT
GCGGGTTCGC CCTCACCCGA TGCCGCCAAT GTAGTAAATG CAATGAATAC CGTTGGCAGC
AAGTTGGCGC TGGATATCTC GGTATCGGAT GACCGCATTA AAGTTAAGCC TAAGTCTATC
CCGCCTGGCA TTGTGATCGA TGCCGACACC GGCACCAACT AA
 
Protein sequence
MSKKLVTDIV LNLSGNLSEK AIRYGDQIKN LGEKSKVGFG MISSSAAAAS RGIDTFGNRA 
ILGVSAGAIA FERTFIKTAA EFERYQIMLN KLQGSEANGL KAMEWIEKFT QETPYGVNEV
MNSFIRLKAF GLDPMDGSLQ AIADQAAMMG GTAETVDGIA LALGQAWTKG KLQGEEALQL
LERGVPVWDY LIKASKDLGK NNGVGYTAAQ LQDMASKGLL TRDAIKSLIK EMGSASQGSS
KKQMESWNGM ISNMGDAWTI FKKDVMSSGA FTVLKTELGG VLKQLDEMKK TGEYDKLVEK
VGKDLVEGFK TAAEAARGLR DVGRDLLPIL KAIGSGASAI ADAVGGYENL AKILLSVYML
NKALRIGAPL LKGAIGAGGF VFDKATGGLG GKGKGGISDL GVMPVYVVNM GAGGMGGGLP
DGVDPTGTKK GASKASRIFN LQNLAALGTV GYAANMTYQN PDDWLPFNLR RKSELDPTAL
HGIPAAPGLL DVLDDFKRWF AGSPSPDAAN VVNAMNTVGS KLALDISVSD DRIKVKPKSI
PPGIVIDADT GTN