| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2626 |
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| Symbol | clpA |
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| ID | 1170328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2761285 |
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| End bp | 2763552 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637344453 |
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| Product | ATP-dependent Clp protease, ATP-binding subunit ClpA |
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| Protein accession | NP_718211 |
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| Protein GI | 24374168 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACA AAGATCTGGA AGTCACCTTA AATCTGGCGT TTCAGCAAGC CAGAGAAGCT
CGTCACGAGT ATATGACGGT TGAACATCTG TTATTAGCGC TGATAGACAA TCCTGCTGCT
CAAGAAGCGC TCATCGCCTG TGGCGCGAAT TTAGATAAAC TCAGAGATGA AGTCGCAAGC
TTTATCCAAC AAACTACCCC AATCATTGCG GATATGGATG ATGACAAAGA AACCCAGCCA
ACACTTGGGT TTCAGCGGGT ACTGCAACGC GCCGTATTTC ATGTTCAGTC TTCAGGCCGC
AATGAAGTCA CAGGTGCCAA CGTGCTGGTG GCGATTTTTA GTGAGCAGGA ATCCCAAGCG
GTTTATCTGT TGCGCCGCAG CGATATCAGC CGATTAGATG TGGTGAATTT TATTTCCCAT
GGTTTTTCAA AAAATGAGGA TAGCGACGCT CATCAAGATC AAGAGCGTAG CGAAGAGCAA
GCCGAGGCTA GCGAGGAACG TAGCATGTTG TCGCAGTTTG CGACCAACTT AAACCAGCTT
GCAAAACAAG GTGTGATTGA TCCACTGATC GGTCGTGATC AAGAAATCGA ACGTGCCATC
CAAACCTTAT GTCGTCGCCG TAAAAACAAT CCACTATTGG TCGGTGAGGC GGGCGTAGGT
AAAACCGCGA TCGCTGAAGG TTTGGCCTAT CGTATCGTTA ATCATCAAGT GCCAGAGGTG
ATGGCGCAGG CGACAGTGTA TTCCCTCGAT TTAGGCTCTC TACTTGCGGG CACTAAATAC
CGTGGCGATT TTGAAAAACG CTTTAAAAAT TTGCTAAAAG AACTCAGTGC GGACAAACAC
GCCATTTTAT TTATCGATGA AATCCACACC ATTATTGGTG CGGGGGCGGC ATCGGGTGGG
GTGATGGATG CCTCCAATTT GCTTAAGCCT TTATTATCGA GTGGCAATTT ACGTTGTATG
GGCTCAACCA CTTTCCAAGA ATACCAAAGT ATTTTTGAGA AAGACCGCGC ATTGGCTCGT
CGTTTCCAAA AGGTCGATAT CAACGAACCT TCCGTGGCTG AAACCACTAA AATTCTGATG
GGCTTAAAGT CCAAGTACGA AGAATACCAC GGTGTGCGTT ACACCCAAGC AGCAATCAAC
AGTGCGGCAG TGCTGTCGGC TAAACATATT AATGACAGAC ACTTGCCCGA TAAAGCTATT
GATGTGATCG ATGAGGCGGG CGCTCGGATG GCTATGTTGC CACAGAGCAA GCGCAAAAAG
ACCATAGGTC AGGCTGAAAT CGAAACCATA GTGGCAAAAA TTGCCCGTAT TCCTGAAAAG
TCAGTTTCTG CAACCGATAA GGATTTACTG CGTAATCTTG AGCGCAATCT TAAGATGGTG
GTGTTTGGTC AAGATAAAGC GATTGAGACC TTAAGCTCGG CGATCCGATT ATCACGAAGT
GGTTTAGGGA CAGATAAGAA ACCCGTTGGT AGCTTTTTGT TTGCAGGCCC GACAGGAGTC
GGTAAGACAG AAGTGACAAA CCAGTTAGCC AATTGCCTTG GTATGAAACT GGTACGTTTT
GATATGTCTG AATACATGGA AAGCCATACG GTTTCTCGCT TGATAGGCGC GCCTCCTGGT
TATGTAGGAT ACGATCAAGG TGGTCTATTG ACCGATGCTG TGATTAAGAA TCCCCATTGT
GTTGTGCTGC TCGATGAAAT CGAAAAAGCG CATCCTGATG TCTATAACCT GCTGCTGCAG
GTGATGGATC ACGGCACGCT GACGGATAAC AATGGCCGTA AAGCTGACTT TAGACATGTC
ACCTTAGTGA TGACAACAAA CGCTGGGGTA CAGGAAACGA TTCGTAAATC CATTGGATTT
ACCCAACAGG ATCATACCCA AGATGCCCTG TCGGAAATTA ATCGGGTGTT TTCACCTGAG
TTTCGTAATC GCCTTGACTC CATCATTTGG TTCAACCATT TAGATATGAC CATCATTGCC
AAAGTGGTGG ATAAATTCTT AGTTGAACTT CAGGCACAGC TTGATGCGAA ACATGTGGTG
TTAGAAGTCA GTGATGAAGC CAGAACGTTA CTCGCCCAGA AAGGTTACGA TAAGAGCATG
GGCGCTCGCC CAATGGCACG AGTGGTGACT GAGCTTATCA AACGCCCATT AGCGGATGAG
CTCCTCTTTG GTGAGCTAGA ACATGGTGGC ATCGCCCATG TGGATGCGAA AGATGGTGAA
ATCGTTATCC ACGCTGAACG CAATGAAAAA ACCACCAGCA AGGCTTAA
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| Protein sequence | MLNKDLEVTL NLAFQQAREA RHEYMTVEHL LLALIDNPAA QEALIACGAN LDKLRDEVAS
FIQQTTPIIA DMDDDKETQP TLGFQRVLQR AVFHVQSSGR NEVTGANVLV AIFSEQESQA
VYLLRRSDIS RLDVVNFISH GFSKNEDSDA HQDQERSEEQ AEASEERSML SQFATNLNQL
AKQGVIDPLI GRDQEIERAI QTLCRRRKNN PLLVGEAGVG KTAIAEGLAY RIVNHQVPEV
MAQATVYSLD LGSLLAGTKY RGDFEKRFKN LLKELSADKH AILFIDEIHT IIGAGAASGG
VMDASNLLKP LLSSGNLRCM GSTTFQEYQS IFEKDRALAR RFQKVDINEP SVAETTKILM
GLKSKYEEYH GVRYTQAAIN SAAVLSAKHI NDRHLPDKAI DVIDEAGARM AMLPQSKRKK
TIGQAEIETI VAKIARIPEK SVSATDKDLL RNLERNLKMV VFGQDKAIET LSSAIRLSRS
GLGTDKKPVG SFLFAGPTGV GKTEVTNQLA NCLGMKLVRF DMSEYMESHT VSRLIGAPPG
YVGYDQGGLL TDAVIKNPHC VVLLDEIEKA HPDVYNLLLQ VMDHGTLTDN NGRKADFRHV
TLVMTTNAGV QETIRKSIGF TQQDHTQDAL SEINRVFSPE FRNRLDSIIW FNHLDMTIIA
KVVDKFLVEL QAQLDAKHVV LEVSDEARTL LAQKGYDKSM GARPMARVVT ELIKRPLADE
LLFGELEHGG IAHVDAKDGE IVIHAERNEK TTSKA
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