Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2620 |
Symbol | |
ID | 1170322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2756942 |
End bp | 2757898 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637344447 |
Product | hypothetical protein |
Protein accession | NP_718205 |
Protein GI | 24374162 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAATA TCATTGAGCA GTTGTTGTTT TCTGCCTCGA TAACCGGCCC CATCTGTTTA ATGTTAGCCC TAGGCGTGAT ACTTAAACGC ACTCAAGTGA TCGACGAGCA CTTTATTGAT GTCGCCTCCA AACTGGTTTT TAATGTCACG CTGCCTGCGT TGTTGTTTTT AAGCATTATT AGTTCGCATC ACGATCTTGC CGCCAGTGCA CCGTTAATAG GCTATGGTCT ATTGGCTAAT CTGCTGTTTT TTATCCTCTC GACCTACGCG ACGAAACGAT TTTTCCCTGC GCCAAAGGAT CAAGGCGTTA TTATTCAAGG GGGATTTAGG GCCAATACCG CCATTATCGG CTTAGCCTAT GTGTCTAATG CCTATGGAGA ATCAGGTGTT GCCTTAGCCG CGGTTTATGT GGCCGCCATG ACGCTGCTCT ATAATATTCA AGCCGTGGTT TGCTTAAGTC CGAGGGATGA GGAATCAAGC CGCCACGCTT TTACTGTGAT CATAAAAACC ATCACCAAAA ATCCGCTGAT CATTGCCATT ATCCTTGGCA TGTTGTTTTA CCTGCTAGCA ATACCTGTAC CGAAAATGGT CCTCGATGCG GGACAATACT TTGCCAATAT GACGCTCCCA TTAGCACTGC TCTGCACTGG CGGTTCACTC AATATTGGAT CGCTTAAGCA TGAAAAGTAT GCCACTTGGT TCTCAACCGC CTTAAAACTT ATCTTTGCTC CGCTATTTAT CAGCTTAGGT GCCTTGATTT TTGGCTATCG CGGGGTGGAA CTTGCCTTAG TCTTTTTAAT GAGTTCTGCG CCCACTGCGG CCGCCAGTTA TGTGATGGCG CGGGCCATGG GTGCCAATGC CACGCTTGCG GCCAATATTA TCGCCTTGAC CACTGTTTGC TCACTGTTCA CTTGCACCTT AGGTATTTTT ATCCTGACAA TTTTTGGATT AATCTAA
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Protein sequence | MGNIIEQLLF SASITGPICL MLALGVILKR TQVIDEHFID VASKLVFNVT LPALLFLSII SSHHDLAASA PLIGYGLLAN LLFFILSTYA TKRFFPAPKD QGVIIQGGFR ANTAIIGLAY VSNAYGESGV ALAAVYVAAM TLLYNIQAVV CLSPRDEESS RHAFTVIIKT ITKNPLIIAI ILGMLFYLLA IPVPKMVLDA GQYFANMTLP LALLCTGGSL NIGSLKHEKY ATWFSTALKL IFAPLFISLG ALIFGYRGVE LALVFLMSSA PTAAASYVMA RAMGANATLA ANIIALTTVC SLFTCTLGIF ILTIFGLI
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