Gene SO_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2620 
Symbol 
ID1170322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2756942 
End bp2757898 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content46% 
IMG OID637344447 
Producthypothetical protein 
Protein accessionNP_718205 
Protein GI24374162 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAATA TCATTGAGCA GTTGTTGTTT TCTGCCTCGA TAACCGGCCC CATCTGTTTA 
ATGTTAGCCC TAGGCGTGAT ACTTAAACGC ACTCAAGTGA TCGACGAGCA CTTTATTGAT
GTCGCCTCCA AACTGGTTTT TAATGTCACG CTGCCTGCGT TGTTGTTTTT AAGCATTATT
AGTTCGCATC ACGATCTTGC CGCCAGTGCA CCGTTAATAG GCTATGGTCT ATTGGCTAAT
CTGCTGTTTT TTATCCTCTC GACCTACGCG ACGAAACGAT TTTTCCCTGC GCCAAAGGAT
CAAGGCGTTA TTATTCAAGG GGGATTTAGG GCCAATACCG CCATTATCGG CTTAGCCTAT
GTGTCTAATG CCTATGGAGA ATCAGGTGTT GCCTTAGCCG CGGTTTATGT GGCCGCCATG
ACGCTGCTCT ATAATATTCA AGCCGTGGTT TGCTTAAGTC CGAGGGATGA GGAATCAAGC
CGCCACGCTT TTACTGTGAT CATAAAAACC ATCACCAAAA ATCCGCTGAT CATTGCCATT
ATCCTTGGCA TGTTGTTTTA CCTGCTAGCA ATACCTGTAC CGAAAATGGT CCTCGATGCG
GGACAATACT TTGCCAATAT GACGCTCCCA TTAGCACTGC TCTGCACTGG CGGTTCACTC
AATATTGGAT CGCTTAAGCA TGAAAAGTAT GCCACTTGGT TCTCAACCGC CTTAAAACTT
ATCTTTGCTC CGCTATTTAT CAGCTTAGGT GCCTTGATTT TTGGCTATCG CGGGGTGGAA
CTTGCCTTAG TCTTTTTAAT GAGTTCTGCG CCCACTGCGG CCGCCAGTTA TGTGATGGCG
CGGGCCATGG GTGCCAATGC CACGCTTGCG GCCAATATTA TCGCCTTGAC CACTGTTTGC
TCACTGTTCA CTTGCACCTT AGGTATTTTT ATCCTGACAA TTTTTGGATT AATCTAA
 
Protein sequence
MGNIIEQLLF SASITGPICL MLALGVILKR TQVIDEHFID VASKLVFNVT LPALLFLSII 
SSHHDLAASA PLIGYGLLAN LLFFILSTYA TKRFFPAPKD QGVIIQGGFR ANTAIIGLAY
VSNAYGESGV ALAAVYVAAM TLLYNIQAVV CLSPRDEESS RHAFTVIIKT ITKNPLIIAI
ILGMLFYLLA IPVPKMVLDA GQYFANMTLP LALLCTGGSL NIGSLKHEKY ATWFSTALKL
IFAPLFISLG ALIFGYRGVE LALVFLMSSA PTAAASYVMA RAMGANATLA ANIIALTTVC
SLFTCTLGIF ILTIFGLI