Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2606 |
Symbol | |
ID | 1170309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2741513 |
End bp | 2744122 |
Gene Length | 2610 bp |
Protein Length | 869 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637344434 |
Product | PqiB family protein |
Protein accession | NP_718191 |
Protein GI | 24374148 |
COG category | [R] General function prediction only |
COG ID | [COG3008] Paraquat-inducible protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGAAAA AACTCTTTTC GCCGATTTGG CTGCTCCCTA TTGTGGCGCT CGCACTCGGC GCTTGGCTGG GTATTAAAAG CATCAAAGAA TCGGGCGTTG AAATTCAGAT CCACTTTCCC AGTGCAACGG GAATTGATGT GGGCAAAACC TTAGTCAAAT ACCAAGGTTT AACCGTCGGT AAGGTGAAAG ACATTGGCAT TGACGATGAT CTTAAAGGCG TGAACGTGAA AGTGATGATG GACTATCGCG CTAAACCTTT CTTAAATAAA GAGACCCTCT TCTGGTTAGT CACCCCAAAG GCGAGTATCA CAGGCGTTGA AGGTTTAGAT GCGCTGTTTT CGGGCAACTA TATTGCCATT CAACCGGGTA AAGGCAATGC CGCAACGTTC TTTGAGGCTG AGCGTCAGCC ACCACCGATG CAAATCGGCT CCGAAGGGGT GATGATTGAA CTCACTGCCG ATAAGCTGGG TTCATTGGAC GTTGGCTCAC CCGTTTTCTT TCGCCAGATC CCTGTGGGCA GTGTCGTCAG TTACCGCTTA GATGGTAACG CGAGAGTCAT TATCAGTGCG TTTATTCAAG AACAATACGC GCGTTTAGTG AAGAAAAATT CCCATTTTTG GAATGTCTCT GGTGTAAAAG TCGACGCCAG TTTAGCGGGC ATTAAGGTCA ATACCGAGAG CTTGGCCTCC ATCCTTGCGG GTGGGGTGAG TTTTAGTTCC GATGAAAAAG CAGCAGCTGC ACAAAATGGC GACAGTTTTG CCCTCTATGA TTCCGAAACC AGTGCTTTAG GCGGAGTTGA AGTGAGCTTA ACCATGAACG ATGGCAATGG GATTGATAAA GGCACCCGCA TCGTATATCG GGGTATCAGC GTTGGCTCGA TTCAAAGTAA AAACCTCACC ACCACTGGCG TCACAGCGAT TGCCAAGTTT GAGCCTGAGT ATGCCAATTT ATTAACCAGC GACGGACGTT TTTGGTTAGA GGGCGCGGAT ATTTCACTGT CTGGTATCAA AAATCCTGAA CGTTTACTGA CAGGTAGCGT GATTAACTTT TTACCTGGCA CAAATGCCAA TACGGCGCTA CCAAGCAGCT TCGCTCTGCA ATCCTCAGCA CCTGATTTAC TGCAAGCCAA AAAACGTCTG TTGACTATCA CCTCAGCAGA AAATATGGGA TTAACCGCTG GTGCAGAAGT GCGCTACAAA CAGTTGCCTA TTGGCCAAGT TCTTGCGGTG AAGTTAACTA AAGATCTTTC GGCGGTAGAA TATCAGCTTG AACTACAACC TGAATTTGCC AGTTTAGTCC GTAGTGATAG CTATTTTATA CCTGAGTCGG CGCTGAGTGT CGATGCATCC ATTGAGGGGG TATCTGTCAA AACCCGCGAT CTGGCGACAT TAACCAAAGG TGCTGTGAGT CTTATTCCCG GCAGCAATAA CACGCCTGTT GCAGCCAATG CGCGCTTATC ACTCTTTAGC TCTGTTGAGG AAGCGAAGCA GTTTTTCGAG CGCCAGCAAC GTCTTTATTT TACGTTGACC AGCCAAGATG GCGCAGATGT CAGCCAAGGC TCGCCAATTT ACTATAAAAA AATGCAAATC GGTCGTGTTG AGTCGGTGAA TTGGCAAAGT AAAACTGAAG ACTTTGCGAT TAAGATCGCC ATCGATAAGC AGTTCCAGCC CTTAATGCAA AAACCGAAAG TATTTTGGCG TAATAGCGCA CTGGATGTCA GCGCCAGCCT AGCGGGTATT GACGTCGCCG TTGCGCCGCT TCAGGGCGCA CTAAAAGGCA GTATCAGCCT AGGCTTATTG GAGAATCCCC TCGCAGATCC TACTGCTTCG CTCAAACTTT ATGAAAATAA ACAGTTAGCC TTAGCCCAAG CGCAAGCTAT TAGGCTCACC CTATCCGCCT CGGCTAAATT GGCCGCTAAA GCAGCGATTC GTTATCAAGG GCACCAAGTG GGTGAAGTGA CTCAGGTTAA GCTTAATGCA GACCTCAATA CCCTCTCGGC CACCGCCTAT CTCTATGGCG AATATGCGGA TCATTTCAGC AGCAGTGACG CCGAGTATCA TATGGTCGAA GCACAAATTT CTTTAGCGGG CATTAAAGCC CCAGAAACCT TAATCACAGG GCCTTATATT GGGGTGTTAC CAGGTAAGAG CAAACAAAAG GCCACGCAAT TCCAAGCTAA ACTCGTTGAG AGCAGCTATG CCAATGTGGC CGAAGATGCG CTCAAGTTTA CCCTAGAGGA TAGCAACCTA GGCTCGATGA AAGTCGGCAC GCCTATTTTC TTCCGTGGTC TTAAGGTTGG CCAAATCGAC GGCTACAGCC TGTCTTCTCA AGGTAACAGT GTGTTAATGC AAGCACACAT TGAGCCGCAA TACCGTCACT TAGTAAATAA GACGAGTCAG TTCTGGGATG CTTCTGGTAT CAAAGTGGAT GTAGGGATTT TCTCAGGCGC GCAGATAGAA GCGGGTTCAC TTGAAACCCT ACTGGCGGGC GGCATTAATG TCGCTACCAA GGAAACAACA CAAGCAAACA ATCGCTTAAG CCAAGGTGCT GTGATTACAC TGCAGCATAA AGCCCAGACT GAATGGCAGG AATGGGCACC CGCGCAATAG
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Protein sequence | MKKKLFSPIW LLPIVALALG AWLGIKSIKE SGVEIQIHFP SATGIDVGKT LVKYQGLTVG KVKDIGIDDD LKGVNVKVMM DYRAKPFLNK ETLFWLVTPK ASITGVEGLD ALFSGNYIAI QPGKGNAATF FEAERQPPPM QIGSEGVMIE LTADKLGSLD VGSPVFFRQI PVGSVVSYRL DGNARVIISA FIQEQYARLV KKNSHFWNVS GVKVDASLAG IKVNTESLAS ILAGGVSFSS DEKAAAAQNG DSFALYDSET SALGGVEVSL TMNDGNGIDK GTRIVYRGIS VGSIQSKNLT TTGVTAIAKF EPEYANLLTS DGRFWLEGAD ISLSGIKNPE RLLTGSVINF LPGTNANTAL PSSFALQSSA PDLLQAKKRL LTITSAENMG LTAGAEVRYK QLPIGQVLAV KLTKDLSAVE YQLELQPEFA SLVRSDSYFI PESALSVDAS IEGVSVKTRD LATLTKGAVS LIPGSNNTPV AANARLSLFS SVEEAKQFFE RQQRLYFTLT SQDGADVSQG SPIYYKKMQI GRVESVNWQS KTEDFAIKIA IDKQFQPLMQ KPKVFWRNSA LDVSASLAGI DVAVAPLQGA LKGSISLGLL ENPLADPTAS LKLYENKQLA LAQAQAIRLT LSASAKLAAK AAIRYQGHQV GEVTQVKLNA DLNTLSATAY LYGEYADHFS SSDAEYHMVE AQISLAGIKA PETLITGPYI GVLPGKSKQK ATQFQAKLVE SSYANVAEDA LKFTLEDSNL GSMKVGTPIF FRGLKVGQID GYSLSSQGNS VLMQAHIEPQ YRHLVNKTSQ FWDASGIKVD VGIFSGAQIE AGSLETLLAG GINVATKETT QANNRLSQGA VITLQHKAQT EWQEWAPAQ
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