Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_2587 |
Symbol | hemB-1 |
ID | 1170289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 2713793 |
End bp | 2714794 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637344415 |
Product | delta-aminolevulinic acid dehydratase |
Protein accession | NP_718173 |
Protein GI | 24374130 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGCA CACGAGAAAA TACCATCGCC CCCCTTCGCC GTTTAAGACG CCTGCGCCGC ACCGAGGCCA TGCGTGATCT GGTACGTGAA ACCCATGTCT CACTCTCCGA CTTGATCCAC CCACTCTTTA TTGAAGAACA CATTAACCAA GCTGTGCCAA TTTCAACCCT GCCGGGGATT TGCCGTCTGC CCGAAAGCGC ACTTGCCGAT GAGATCCAAA GGCTCTATGC CTTAGGGATC CGCTATGTGA TGCCCTTTGG GATTTCCCAT ACCAAAGATC CACAGGGCAG CGACACTTGG AATGACAATG GATTGCTCGC ACGGATGATC CGTACCATAA AAGCCACCGC GCCAGAGATG ATGGTGATCC CCGATATTTG TTTTTGTGAA TATACCGACC ATGGACACTG CGGCGTGTTG CACCAAGACG AAGTCTGTAA CGACCAAACC GTGGCTAACT TAGTCAAACA ATCCGTCACC GCCGCTAAAG CGGGAGCTGA TATGTTGGCG CCATCAGCAA TGATGGATGG TCAAATTAAA GCGATACGAC AAGGGCTGGA TGAAGCAGGC TTTGAACACG TAGCCATTTT GGCCCACGCA GCCAAGTTCG CCTCCTCTTT CTACGGGCCT TTTAGGGCCG CTGTAGATTG TGAACTCAGT GGTAACCGCA AAGGCTATCA GCTCGATTAC GCCAATGGCC GCCAAGCATT GCTCGAAGCA CTGCTCGATG AGGAAGAAGG CGCAGATATT TTGATGGTAA AACCCGGCAC GCCATATTTG GATGTATTAA GTCGCCTAAG ACAAGAAACC CACCTCCCCT TAGCGGCCTA TCAAGTGGGT GGCGAATATG CAGGTATTAA ATTTGCTGCG CTGGCGGGCG CCCTCGATGA GCGCGCCGTT GTCACTGAAA CCTTTATCGG TTTAAAACGG GCTGGTGCCG ATTTAATTGT CAGTTATTAC ACTAAACAAT ATGCCGAGTG GTTAGCAGAG TTACGCGAAT AA
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Protein sequence | MSSTRENTIA PLRRLRRLRR TEAMRDLVRE THVSLSDLIH PLFIEEHINQ AVPISTLPGI CRLPESALAD EIQRLYALGI RYVMPFGISH TKDPQGSDTW NDNGLLARMI RTIKATAPEM MVIPDICFCE YTDHGHCGVL HQDEVCNDQT VANLVKQSVT AAKAGADMLA PSAMMDGQIK AIRQGLDEAG FEHVAILAHA AKFASSFYGP FRAAVDCELS GNRKGYQLDY ANGRQALLEA LLDEEEGADI LMVKPGTPYL DVLSRLRQET HLPLAAYQVG GEYAGIKFAA LAGALDERAV VTETFIGLKR AGADLIVSYY TKQYAEWLAE LRE
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