| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2544 |
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| Symbol | |
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| ID | 1170251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2675965 |
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| End bp | 2679024 |
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| Gene Length | 3060 bp |
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| Protein Length | 1019 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637344375 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | NP_718130 |
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| Protein GI | 24374087 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCGA TGATTAAAAC ATATAACAAA TCAATTAAAA GACACCGATT ATTGTTTTTA
CTTTACTGCA TTACTGTTGG CTTGTTAGCA AATTTATCTG TAGTAGCTAT TCCTATAGCA
GTCCCTTTAA ATGTTGGTAA TGTTGCCATC TTGGTTATAT TAGCCCGTTT AGGTCCACTA
TGGGCTCTAG TATGCTTTGC TTTTGTAACG TACCCACTAC CGTCAGATAT AGCAATCATT
CTTACTATTG TTCAGGTAAT ACTATTTGGA TTCTATATAA ATCAAAAAAA TAGCAGCATC
ATTAAAATAT CCATAGCTTA CGTTGCAATA GTCTTTATAG CCAACAAATT TTTATTACCA
GAAGCTATTA CAGATAATCA AATATCTTTA CTAACATTTA CATCATTATC AACTGCATTA
TTTATTTGGA CCATTAAAGC TACAAACTTA CTACTTTCCT TATATGTCAA TAATGAGCAA
TTAAGAAAAC AGTCATTACA GCACCAACTA TCATATAGAG TGGGATTATA TACAGCGATC
CCTGCAACAT TATTAATCAC ACTTGGACTA AATGGAGTAA CTAATTTACA TCTAGTAAAG
CAAATGGCTT ATTATCAAAA TGAAGTTAAC GAACTCAATA AAAATATAGA AGAAAAATTA
AAAAACTATT CTAACAAGAT TGAAACCATT GCAAAGCTAA CGGACATAGA AGTAACTAAA
CGTATTTTAA TGCAACTTGT AAGTCAATCG CCAGAATTTA TTTCAGCACT TATCACCGAT
ACAAACGGAA CTGTAAATAA ATTTTACAAA AAAGATATTA ACGATGATAG GATTGCCAAG
GCGAGCGTTG CTGACAGAGC TTATTTTTAC GAAGTAAAGA AAACAATGTC GACTTATATT
AGCGATACTT TTACTGGAAG GTCCTTAGGA GAGGACCAAC TATTCGCAGT CAGCACACCA
ATTATTGATA ACAATCAGTT CAACGGTGTT TTACAATTAG CCATAAAATT AGATTCACTA
TTAGAAGTAT TTAACTTACC TAATGATAGT ATATCTCACC GAATCCTCAT TGATAATTCA
GGTAAAAAAG TTTGGGGAAA TAATATCAGC GGAGATGTAG GAAGTATATG GATTCGCCCA
AAACACAGTG AACCGATGCA AAAGGCTTTT CTTGAAAAAA GTCTATTTAA CCCACTTGAA
CCAATCATTT TTAGCCAAGA TGCACATCAT CTTATCATTA GTAATCAAGT TGGTGCAACA
GATTGGAAGC TATATTTTTT TATTGACACT GATGAGTTAA CTTTAGACTT TTCAATTTAT
TATTTACTTT CATTATTGCT GATTACTTTA ATATTGGAAA TATCTGTTCA ATTTTCAAAG
CGCTTTGTGA AACACTATAC ACAAGCATTA GAACTATTAG TTGATTATAC TCAGCAGTGG
GATGGTAAAA GCACCACAAA GAAAAATTTA AACTTTACAC AATCAGCACT CGAAATCGAT
ACCTTAGCTC ACAGCTTCGT CAACATGCAA CGAAGAGTCG CAGGTGCTCA TCATGCAATT
ATATCAACAA TGAATGAAGT CAAACTTCTT AATGAAGCAT TAGAAGAAAG AGTTGAAAAA
CGAACAAAAG AATTAGAACA AGAACGCGAT AAAGCTAACC AGCTAGCAGC AGTAAAAGCA
CGCTTTTTAG CTAATATGAG TCATGAAATC CGTACACCAA TTACTATTAT CAAGGGCTTT
ACTGAACAAA TTTTACCCAA CACTCAAGGT GAGGTACATA ATGCTCTTTG CAAAATAGAA
CAAAATACTT TACATCTCCA AAATGTTATC AATGACATTC TGGATGCGGC TAAAATTGAT
GAAGGGAAAA TGACTATTGC AGAACAAACT GTTGCCATTA TTCCTTTATT GAATAGCCTC
AGTGATTCTA TGAAATTTTT AGCAAGAACG AAAAACTTAA CTACAGAACT GAATATCGAC
ATTGCTGATA TTGAACATAT AATAACAGAC CCATTCAGAC TTAAACAAAT ACTGCTAAAC
TTTATTAGCA ATGCTGTAAA ATTCACACCT AAAGGTACGG TAAAACTGGT AGCAAATATA
ACGAATGCAG ATGAGTTATG TATAGCTGTT ATTGATAAAG GAATTGGTAT TTCAGATCAG
CAAGCATCGA CGTTATTCGA GGCTTTTACG CAAGCCGACT CAAGTACCAG TCGAGATTTT
GGTGGTACAG GTTTAGGATT ATTCATCAGT AAACAATTAG CTGATGCAAT GTTTATCAAA
CTCCATATGC AAAGCGAGCT AGGAGTCGGA TCATGTTTTT CAGTCACGCT CCCTGAAAGC
AAAATCATAA AAAATTTAAC TGAGTTTTCT AAAAATGAGA AAAAGATTGA GCACACGACA
CCAGACTGGA AAAATTACCA TGTACTAATT GTTGATGATG TAGAGGATAT TAGAGAGTTA
ATTGATATCT ACCTAAAAGA TACAGAAATT GCTGTCGATT TTGCTCAAAA TGGTCAGCAA
GCCATTCAGT TAGTAGAAAA ATCACATTAT GATTTAGTCA TTTTAGATCA ACAAATGCCT
ATTATGGATG GATTCACGGC TGCAAAAGCG ATTCGAGAAT TTAATAAAAG TATCCCACTA
TTACTATTAA GTGCCGATAT TCTTGATACA GAACCCCATC AAAAAAGTCC ATTTAATAAA
ACTATAGCCA AACCATTCAC TAAAAATCAG TTGATAGAGA CAATTAGACT TTTTATAGTT
GATAATTCTA TCTCTACAAA AAAGGTAAAT GAGGAGGACG AGGATGAGTT AACAATAGAG
TACTTACATA CATTACCCAA TGTATTATTA TTATTAGAAA AGCTGGTTAA ATGTGAAGAC
AGAACTCATT TAGAACATGA ATTACATAAA CTGAAAGGAA CAAGTGCTTG TTTAGGACTA
ATTGCTATTT CTCATTGTGC TGCAAATCTT CACAATTTAC TTAAAGAGCG GATGATAAAA
CTAAATGAGC TTGATGACAT ATCATTGGCT GTAAAAAATG CTCTCAAAGA AAAAGAATAA
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| Protein sequence | MLAMIKTYNK SIKRHRLLFL LYCITVGLLA NLSVVAIPIA VPLNVGNVAI LVILARLGPL
WALVCFAFVT YPLPSDIAII LTIVQVILFG FYINQKNSSI IKISIAYVAI VFIANKFLLP
EAITDNQISL LTFTSLSTAL FIWTIKATNL LLSLYVNNEQ LRKQSLQHQL SYRVGLYTAI
PATLLITLGL NGVTNLHLVK QMAYYQNEVN ELNKNIEEKL KNYSNKIETI AKLTDIEVTK
RILMQLVSQS PEFISALITD TNGTVNKFYK KDINDDRIAK ASVADRAYFY EVKKTMSTYI
SDTFTGRSLG EDQLFAVSTP IIDNNQFNGV LQLAIKLDSL LEVFNLPNDS ISHRILIDNS
GKKVWGNNIS GDVGSIWIRP KHSEPMQKAF LEKSLFNPLE PIIFSQDAHH LIISNQVGAT
DWKLYFFIDT DELTLDFSIY YLLSLLLITL ILEISVQFSK RFVKHYTQAL ELLVDYTQQW
DGKSTTKKNL NFTQSALEID TLAHSFVNMQ RRVAGAHHAI ISTMNEVKLL NEALEERVEK
RTKELEQERD KANQLAAVKA RFLANMSHEI RTPITIIKGF TEQILPNTQG EVHNALCKIE
QNTLHLQNVI NDILDAAKID EGKMTIAEQT VAIIPLLNSL SDSMKFLART KNLTTELNID
IADIEHIITD PFRLKQILLN FISNAVKFTP KGTVKLVANI TNADELCIAV IDKGIGISDQ
QASTLFEAFT QADSSTSRDF GGTGLGLFIS KQLADAMFIK LHMQSELGVG SCFSVTLPES
KIIKNLTEFS KNEKKIEHTT PDWKNYHVLI VDDVEDIREL IDIYLKDTEI AVDFAQNGQQ
AIQLVEKSHY DLVILDQQMP IMDGFTAAKA IREFNKSIPL LLLSADILDT EPHQKSPFNK
TIAKPFTKNQ LIETIRLFIV DNSISTKKVN EEDEDELTIE YLHTLPNVLL LLEKLVKCED
RTHLEHELHK LKGTSACLGL IAISHCAANL HNLLKERMIK LNELDDISLA VKNALKEKE
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