| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2539 |
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| Symbol | |
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| ID | 1170246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2669426 |
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| End bp | 2671402 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637344370 |
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| Product | response regulator |
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| Protein accession | NP_718125 |
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| Protein GI | 24374082 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAT CTTTACTGTT AGTCGATGAC GATGTTGGCA TTTTAAAGGC TTTAACACGC
TTGTTAACTC GTTCAGGCTA TTCAGTAAAG ACAGCCCAAA GTGGCGAGGA AGCGCTAACC
CTATTACTCA ATTATGACTG CAAAGTGGTG TTGACCGATT TTAGAATGCC CTATATGGAC
GGTGGTCAGC TACTTTCTAA AATCAAACGG TTATATCCTG ATATAGTGTC GCTGGTGATC
AGTGGTTATT CTGATTTTGA GTCGGTTAAA TCATTGCTCA ATGCGGGAAG CGCATATCGC
TTTTTACAAA AACCTTGGGA GGATGATGAA CTACTTGGTG AAATCGCCAA TGCATTTACC
CACTACGCTA AGCACTTGTT TCAACACCAA TCTCAAAAAA TGCTGCTGGC AAGTCCCGAT
GCCTTAATCG AAATATCCCA TCCTAATCAC ATTGTGCAAG CCAATATCAC GGCCAGAAAA
CTGTTAGGTT CATCAATGAT CGAAGGTCGT TCATTAGATG AGTTTTTGGT TGAAACGGAC
AGGCAAAGGC TGCAGGAGCA GGCATTGGCT GTTGGCCAAA GTATGTCGAT AAGGCTAATA
AATCATACTG AATTAGAAGT GAGTTGTCGT TTAGCTGGCC CGTATGGCCT CGTTTTGTGT
TTAAATCCCG TGACCGATGG AGAGTTGCTA AACACTGCAG TTGAACTTCC ATCTCTATTA
AATTATCAAC AACTTATCTC TGTTATTGAA CAATATCTCG ACTCCAACTG TTCTGCAGTG
CTTGTTGTCA TCAAGATCAG AAGTTTTGAA CTTTGGAGTC GAATGATTGG CTATTCGGAA
GCACAGCGAA CCATTGAAGA CATCGCATTG CAGCTACTCA ACTCCATGGG CGCGCGAGGG
GAGCTTGCGT TACTAGCAAA TGAACAATTT GTACTTTGTC TGCCGGATGT TGCATCAGAA
ATAGATGCTT TACAGAAGGC GGCATCAATC ATTGATCCTG TGACAGGCAA AGCCAACCTG
ATGTCATCTA AGCTGGATTA TGCGGTCAGC TATTGCCTTA TTCCCGAAGA TGGTGATGAG
CCTCGTACGG TGTTGAATAA TTTATTACTG GGTAATTTGA TGATGGCTGA AGACCCAGTG
CGAATGTTCA TGCGTTATGA TCAGCAAGCG ATTGAACGGA AAAAACACCA AATCTCTTTA
AATCAGGCGT TATTTCATGC GGTGCAACAA CGTCAATTGT TCCTCAATTT TCAGCCAAAA
TTTGATTTTG CCAAATATAC TTTGTCTGGG TGCGAAGCCT TGATACGTTG GCAGCATCCT
GAATTTGGCA TGGTTTCACC GGCGTTATTT ATCCCTTTAG CTGAGCAACA TGGTCAAATG
GTCGACATTG GCTATTGGGT GCTTAAAACG GCTTTTATCA CCGCCGCGAA ATGGCGTAGT
CAAGGCATCC ATTTTGGCAA AATGGCCATT AACATCTCTG GCAGACAACT AATGGAGCCC
GATTTTATCC ACTGGATAAA ACACCATATT CAGCTTACGG GTGTTGAGCC AACCGATTTG
GAATTTGAGT TAACAGAAAC ATTTTTGCTA AATAATCTTG ATGATTGTGC TATTACCCTT
AAAACATTTG CAGAATTAGG CATCAGCATT GCGATAGATG ATTTTGGCAC AGGTTACTCT
TCTTTGAGTT ATCTGAATAA ACTGCCTATC AATGTGCTAA AAATTGACCG TTCACTCGTG
CTCGATATTG AGAGTAACTT GAATACAGAA AGTTTAGTCG CGAATGTGGT TAGGTTGGCA
CATGATCTGA ATATGAAAGT GGTTGTCGAG GGTATTGAAA CATTGGATCA ACTCAATATT
GTCAAAGTCT TAGGTTGTGA TGTCGTTCAA GGATACTGCA TCTCAAAACC GCAATCTGAA
GAGGAGTATT TAGCGCTATT GACTTCTTTT GAAAGTCTTT CAGCAACAAT GGGTTAG
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| Protein sequence | MDKSLLLVDD DVGILKALTR LLTRSGYSVK TAQSGEEALT LLLNYDCKVV LTDFRMPYMD
GGQLLSKIKR LYPDIVSLVI SGYSDFESVK SLLNAGSAYR FLQKPWEDDE LLGEIANAFT
HYAKHLFQHQ SQKMLLASPD ALIEISHPNH IVQANITARK LLGSSMIEGR SLDEFLVETD
RQRLQEQALA VGQSMSIRLI NHTELEVSCR LAGPYGLVLC LNPVTDGELL NTAVELPSLL
NYQQLISVIE QYLDSNCSAV LVVIKIRSFE LWSRMIGYSE AQRTIEDIAL QLLNSMGARG
ELALLANEQF VLCLPDVASE IDALQKAASI IDPVTGKANL MSSKLDYAVS YCLIPEDGDE
PRTVLNNLLL GNLMMAEDPV RMFMRYDQQA IERKKHQISL NQALFHAVQQ RQLFLNFQPK
FDFAKYTLSG CEALIRWQHP EFGMVSPALF IPLAEQHGQM VDIGYWVLKT AFITAAKWRS
QGIHFGKMAI NISGRQLMEP DFIHWIKHHI QLTGVEPTDL EFELTETFLL NNLDDCAITL
KTFAELGISI AIDDFGTGYS SLSYLNKLPI NVLKIDRSLV LDIESNLNTE SLVANVVRLA
HDLNMKVVVE GIETLDQLNI VKVLGCDVVQ GYCISKPQSE EEYLALLTSF ESLSATMG
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