| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2494 |
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| Symbol | |
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| ID | 1170207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2618925 |
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| End bp | 2620784 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637344323 |
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| Product | zinc-dependent metallopeptidase |
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| Protein accession | NP_718081 |
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| Protein GI | 24374038 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTC TATTGAATCG TCCCACAACT CTAGCACTCA CCATAGCGTT AACATTAAAC
CTAACTGCTT GTAATAATAA ACAAAATACT TCAGAAACTA AGACTTCTAT ACCTGCTAGT
ACAAGTACAC CTGATAAAGC TCAAGCCATT GCCTTTATTC AAGATGCTGA AGCGCAAATG
GCGCAGTTAT CCATTGAAGC GAATCGTGCC GAATGGATTT ATAGCAATTT CATCACCGAA
GATACCGCCG CATTATCGGC CGCAGTGGGT GAAAAAGTCA GCGCTGCGTC CGTCAAGTTC
GCCACTGAAG CCGCAAAGTA TGCCAATGTT GAACTTGATC CCGCTAATGC CCGCAAACTA
AATATTCTAC GTAGCGCATT AGTGTTACCG GCGCCACTTG ACCCCGCCAA AAATGCTGAG
CTGGCACAGA TAAGTTCTGA GCTCAATGGG CTCTACGGTA AAGGCAAATA CTGTTTCGCC
GATGGCAAAT GTATGACGCA ACCTGAGCTG TCTTCCCTCA TGGCGGAATC ACGGGATCCC
GCCAAATTAC TTGAAGCTTG GAAAGGTTGG CGTGAAATAG CTAAACCAAT GCGCCCGCTA
TTTCAACGTG AAGTCGAACT CGCCAACGAA GGCGCAAAAG ACTTAGGTTA CGCTAACCTT
TCTGAGTTAT GGCGCAGCCA ATATGATATG AAACCTGATG AATTCTCTCA GGAATTAGAC
CGTTTATGGA GCCAGGTTAA ACCACTTTAC GAATCCTTGC ATTGTTATGT GCGTGGTGAG
TTGAACAAAG AATATGGTGA TGCCATTGCC CCGAAGACGG GTCCAATTCC GGCACACTTA
CTAGGGAATA TGTGGGCTCA GCAATGGGGT AATGTGTATG ATCTGGTGGC GCCCGAGAAT
GCTGACCCTG GTTATGATGT GACCGAGCTA CTCGCGCAGA AAGGCTATGA CGAGCACAGA
ATGGTGAAAC AAGCCGAAAG CTTTTTCACC TCTTTGGGCT TTGCGCCGCT GCCTGACAGT
TTTTGGAGCC GCTCTTTATT CTTACAACCC AAAGATCGCG ACGTAGTGTG TCATGCCTCG
GCATGGGATC TGGATAACCT CGATGATATC CGCATCAAAA TGTGTATCCA AAAAACCGCT
GAAGACTTCA CCGTCATTCA CCACGAACTT GGCCATAACT TCTACCAACG CGCCTACAAG
CAGCAGCCTT TCCTATTTAA AAACAGCGCC AATGATGGGT TCCATGAAGC CATTGGCGAC
ACCATCGCGC TGTCTATCAC ACCAAGTTAT CTCAAGCAGA TAGGCTTACT CGAAGAGGTA
CCCGACGCTT CAAAGGATAT TGGTTTATTG CTTAAGCAAG CCTTAGATAA AATCGCTTTT
CTGCCTTTTG GTCTAATGAT CGACCAATGG CGTTGGAAGG TATTTAGCGG TGAAATCACC
CCTGCCCAAT ATAACCAAGC GTGGTGGGAG CTGAGGGAAA AATATCAAGG TGTTAAAGCG
CCGACACCGC GAAGTGAGAC CGATTTTGAT CCAGGTGCAA AATACCATGT ACCTGGCAAT
GTGCCTTACA CCCGTTATTT CCTCGCCCAT ATTTTGCAAT TCCAGTTCCA CAAGGCGCTG
TGTGAAACTG CAGGCGATAA AGGACCAGTG CATAGATGCA GCATTTACGG CAATCAAGCT
GCAGGAGAAA AACTTAATAG AATGTTAGAG TTGGGCTCGA GTCAGCCATG GCCTATGGCT
TTAAAGGAAG TAACAGGCAC TGAAACCATG GACGCGAACG CTGTACTCGA TTATTTTGCG
CCGCTCAAAA CCTGGCTTGA TGAGCAGAAC AAGGCTGCGA ATCGTCAATG CGGCTGGTAA
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| Protein sequence | MAILLNRPTT LALTIALTLN LTACNNKQNT SETKTSIPAS TSTPDKAQAI AFIQDAEAQM
AQLSIEANRA EWIYSNFITE DTAALSAAVG EKVSAASVKF ATEAAKYANV ELDPANARKL
NILRSALVLP APLDPAKNAE LAQISSELNG LYGKGKYCFA DGKCMTQPEL SSLMAESRDP
AKLLEAWKGW REIAKPMRPL FQREVELANE GAKDLGYANL SELWRSQYDM KPDEFSQELD
RLWSQVKPLY ESLHCYVRGE LNKEYGDAIA PKTGPIPAHL LGNMWAQQWG NVYDLVAPEN
ADPGYDVTEL LAQKGYDEHR MVKQAESFFT SLGFAPLPDS FWSRSLFLQP KDRDVVCHAS
AWDLDNLDDI RIKMCIQKTA EDFTVIHHEL GHNFYQRAYK QQPFLFKNSA NDGFHEAIGD
TIALSITPSY LKQIGLLEEV PDASKDIGLL LKQALDKIAF LPFGLMIDQW RWKVFSGEIT
PAQYNQAWWE LREKYQGVKA PTPRSETDFD PGAKYHVPGN VPYTRYFLAH ILQFQFHKAL
CETAGDKGPV HRCSIYGNQA AGEKLNRMLE LGSSQPWPMA LKEVTGTETM DANAVLDYFA
PLKTWLDEQN KAANRQCGW
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