Gene SO_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_2452 
Symbol 
ID1170167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp2568492 
End bp2569436 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content49% 
IMG OID637344285 
Productalcohol dehydrogenase, zinc-containing 
Protein accessionNP_718042 
Protein GI24373999 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAAC ATCAAGTTTG GGCATACCAA ACTAAAACCC ACAGTGTCAC CTTGAATTCT 
GTGGACATCC CCGCCTTGGC AGCGGATGAC ATTTTGGTGC AAAACCAAGC CATCGGCATC
AATCCTGTGG ATTGGAAATT TATCAAGGCT AACCCTATCA ATTGGTCGAA TGGCCATGTG
CCAGGTGTTG ATGGTGCGGG TGTCATTGTA AAAGTGGGGG CGAAGGTCGA TAGCAAGATG
TTGGGTCGGC GAGTGGCCTA TCACACCTCG CTAAAACGTC ACGGCAGTTT TGCCGAGTTT
ACGGTTCTCA ATACCGATCG AGTGATGACG TTGCCCGATA ATCTGTCATT TGAGCGGGCG
GCTGCTCTGC CTTGTCCTCT GCTTACCGCA TGGCAAGCAT TTGAAAAAAT ACCGCTGACA
AAACAGCGCG AGGTGCTGAT CGTTGGTTTT GGCGCGGTTA ATAATCTGCT GACGCAGATG
CTGAACAACG CGGGTTACGT CGTTGATCTC GTGTCTGCAA GCCTAAGCCA AGCACTCGCG
GCAAAACGTG GTGTCCGGCA TCTTTATCGG GAGCCATCCC AAGTTACGCA AAAATATTTC
GCCATTTTTG ATGCTGTCAA TAGCCAAAAT GCCGCGGCAC TCGTGCCATC GTTAAAAGCC
AATGGACACA TTATCTGTAT CCAAGACCGC ATTCCCGCGC CGATAGATCC GGCATTTACC
CGCACGATTT CTTACCATGA AATCGCCCTC GGGGCGTTAC ATGACTTTGG TGATCGTCAA
GATTGGCAGA TCCTCATGCA ACAAGGGGAA GCACTATTAA CGCTTATTGC CCAAGGTAAG
ATGGAGATCG CTGCGCCTGA TATTTTTAGA TTTGAGCAAA TGATTGAAGC GCTAGACCAT
AGTGAACAAA CCAAATTAAA AACAGTGTTA ACCCTAAACG AGTGA
 
Protein sequence
MEQHQVWAYQ TKTHSVTLNS VDIPALAADD ILVQNQAIGI NPVDWKFIKA NPINWSNGHV 
PGVDGAGVIV KVGAKVDSKM LGRRVAYHTS LKRHGSFAEF TVLNTDRVMT LPDNLSFERA
AALPCPLLTA WQAFEKIPLT KQREVLIVGF GAVNNLLTQM LNNAGYVVDL VSASLSQALA
AKRGVRHLYR EPSQVTQKYF AIFDAVNSQN AAALVPSLKA NGHIICIQDR IPAPIDPAFT
RTISYHEIAL GALHDFGDRQ DWQILMQQGE ALLTLIAQGK MEIAAPDIFR FEQMIEALDH
SEQTKLKTVL TLNE