16 homologs were found in PanDaTox collection
for query gene SO_2437 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_2437  hypothetical protein  100 
 
 
631 aa  1292    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_1891  hypothetical protein  68.04 
 
 
635 aa  822    Shewanella sp. MR-4  Bacteria  normal  0.851379  normal  0.724529 
 
 
-
 
NC_008322  Shewmr7_2087  hypothetical protein  68.68 
 
 
635 aa  828    Shewanella sp. MR-7  Bacteria  normal  normal  0.489263 
 
 
-
 
NC_008577  Shewana3_1946  response regulator receiver protein  68.72 
 
 
646 aa  845    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2033  hypothetical protein  55.07 
 
 
620 aa  615  1e-175  Shewanella baltica OS223  Bacteria  normal  0.0461575  hitchhiker  0.0000553349 
 
 
-
 
NC_009052  Sbal_2031  response regulator receiver protein  57.19 
 
 
620 aa  614  9.999999999999999e-175  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2314  response regulator receiver protein  56.16 
 
 
619 aa  597  1e-169  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2430  response regulator receiver protein  56.16 
 
 
619 aa  597  1e-169  Shewanella baltica OS195  Bacteria  normal  0.450868  normal 
 
 
-
 
NC_009438  Sputcn32_1931  peptidase M3A and M3B, thimet/oligopeptidase F  53.87 
 
 
583 aa  586  1e-166  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2582  response regulator receiver protein  36.19 
 
 
577 aa  378  1e-103  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0740866  hitchhiker  0.000257822 
 
 
-
 
NC_009901  Spea_2373  peptidase M3A and M3B, thimet/oligopeptidase F  37.58 
 
 
580 aa  363  4e-99  Shewanella pealeana ATCC 700345  Bacteria  normal  0.232056  n/a   
 
 
-
 
NC_009831  Ssed_2023  response regulator receiver protein  35.73 
 
 
582 aa  363  7.0000000000000005e-99  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2086  hypothetical protein  34.21 
 
 
591 aa  308  1.0000000000000001e-82  Shewanella loihica PV-4  Bacteria  normal  0.869328  normal 
 
 
-
 
NC_008345  Sfri_2191  hypothetical protein  34.06 
 
 
600 aa  292  1e-77  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.000298084  n/a   
 
 
-
 
NC_007954  Sden_1894  hypothetical protein  33.76 
 
 
583 aa  257  4e-67  Shewanella denitrificans OS217  Bacteria  normal  0.910891  n/a   
 
 
-
 
NC_008700  Sama_1850  hypothetical protein  28.04 
 
 
554 aa  169  1e-40  Shewanella amazonensis SB2B  Bacteria  normal  0.543722  normal 
 
 
-
 
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