Gene SO_2323 details

Gene Information

• Locus tag: SO_2323
• ID: 1170047
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 2432836
• End bp: 2434776
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637344161
• Product: methyl-accepting chemotaxis protein
• Protein accession: NP_717913
• Protein GI: 24373870
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAAA AACTGACGCT CAGCATGCAG ATTTCTGGCG GTTATGCATT GGTATTATTA 
CTCTTGGTCG TAATTTCATT GGCCGCCTAT TTCGGGCTGA CGAAAGCCAT TAACGGCTTT 
AGTGATTATC GTGCTCTGGC TCGCGACTCT AATATGGCCG GTAGGGTCCA AGCAAATATG 
CTAACGATTC AAATCCAAGC ATATGATTAT ATTTTTCAAA AGAAAGAATC AGCCTACAAA 
GTATTTAATG AGCGTAACGT TATCGTTAAT GACATTATTC AAAAGGCAAT GACAGATATT 
AATGATCCTG AATTAAGTCA GCAAATTTCT GATATTCGTA AAGATATTGT CGATTACAAC 
AGTTATTTTG AGTCGGTAGT GAAATTGATT AAATCTCGAA ATGATGAAGT CACTAACGTG 
CTAGTGCCTA ATGGCTCTGA AGTTGTAAAA CTGATTTCTG ACGCCATGCA TCAATCCTTT 
AATAAAGGGC AAATTGAGGT GGCTTACCGA GCGGGTTCAG TACTCGAATC AGTGCTGAGC 
GCTCGGTTAG CGGCATCAAA ATTCCTTGAG ACAAATTTAG ATGCGGATTT ACAGCAAGCG 
TTGATGGCGA TTGATTTAGC GAAGGGTGAG CGGCTTTCTG CATTAAAAGC TGCGGCAACA 
GATCTCGATA CACAATCAAA ATTAGTCCAA TTTACAAGCA GCATTGACAA TTATGCGTCC 
TCGTTAAAGT CGGTTTATAA CACGATTAAC GAACGAAACG ACATTGTCAA AAATCAACTC 
GACCGCATCG GTCTTGACGT GTCTCGCCAA ACAGAAGATA TCAAATTAAC TATCCAAAAA 
AGACAAGACG CCCTTGGTCC TTTAGTTAAA GTTCAAAATG AACAGACCCT CACCACCGTC 
ATTAGTGTCT CAATCGCTGC TATTTTTATC GGTATTTTCT TAGCGTGGTT TTTAGTGAAG 
TTAATTAAAA AGCCATTAGG AGGTGAGCCA CGTGATATGG AAACAATCGC TCGTGCAATT 
GCTAACGGAG ATTTAACGAT AGAGTTAAAA CAACGTGAAC AAGCAACCGG TGTTTATAAG 
GCAATGATAG ATATGATAGA TAGCCTTACC TCTGTGATCG CTCAAGTTCG AAGTGGTGCT 
GATAATTTGT CTAGTGCTTC GTCACAGGTT AGTAGTACTG CCCAAAGTCT AAGTCAAGGC 
GCAACTGAGC AGGCCGCCAG TGTAGAAGAG ACAACCAGTG CTGTAGAGGA ATTAAATGCG 
TCAGTACAGC AGAATTCTGA AAATGCGAGA GTAACCAACA ATATGGCGAC GGTTGCAGCA 
GAAGAAGCAA GACAAGGTGG AATTGCGGTA GAGCAAACCG TGGCGGCAAT GAAGCAAATC 
GCCGCTAAAA TTAGCTTAAT TGAGGATATT GCTTATAAAA CCAATCTGTT AAGTCTCAAT 
GCGGCCATTG AGGCTGCCCG TGCTGGAGAA CATGGTAAAG GCTTTACAGT TGTCGCCTCT 
GAAGTCAGAA AACTTGCTGA AAACAGTAGT TTAACTGCTC AAGAAATTAA TAAACTTGCT 
AGTGATAGTG TAGGAATAGC TGAAAATGCT GGCCGCCTGA TTGCGAATAT TGTACCAAAT 
ATCCAAAAAA CATCTGATTT AGTTCAGGAA ATAAGTTCTT CCTCTGAGGA GCAGGCGATA 
GGGATCAGTC AGATTAATGA CTCCATGCTG CAACTGGATA AAGCTACGCA GCAGAATGCA 
TCTGCATCGG AGGAGCTTGC GGCAACATCA GAAGAACTTA ATGGTCAAGC TAATCAACTG 
CTTGATGCTG TGGAGTTTTT TAAGCTTGCC ATCAGTAGTG AAAGACCTCA TCAAGGCAAA 
TCAACACACA TGACAGCTTC TGTACGTAAA ACGGCTAAGG CCAAACAGCA TGTTGAACGT 
GCCGATTTCG AACGATTCTG A 

 

Protein sequence

MFKKLTLSMQ ISGGYALVLL LLVVISLAAY FGLTKAINGF SDYRALARDS NMAGRVQANM 
LTIQIQAYDY IFQKKESAYK VFNERNVIVN DIIQKAMTDI NDPELSQQIS DIRKDIVDYN 
SYFESVVKLI KSRNDEVTNV LVPNGSEVVK LISDAMHQSF NKGQIEVAYR AGSVLESVLS 
ARLAASKFLE TNLDADLQQA LMAIDLAKGE RLSALKAAAT DLDTQSKLVQ FTSSIDNYAS 
SLKSVYNTIN ERNDIVKNQL DRIGLDVSRQ TEDIKLTIQK RQDALGPLVK VQNEQTLTTV 
ISVSIAAIFI GIFLAWFLVK LIKKPLGGEP RDMETIARAI ANGDLTIELK QREQATGVYK 
AMIDMIDSLT SVIAQVRSGA DNLSSASSQV SSTAQSLSQG ATEQAASVEE TTSAVEELNA 
SVQQNSENAR VTNNMATVAA EEARQGGIAV EQTVAAMKQI AAKISLIEDI AYKTNLLSLN 
AAIEAARAGE HGKGFTVVAS EVRKLAENSS LTAQEINKLA SDSVGIAENA GRLIANIVPN 
IQKTSDLVQE ISSSSEEQAI GISQINDSML QLDKATQQNA SASEELAATS EELNGQANQL 
LDAVEFFKLA ISSERPHQGK STHMTASVRK TAKAKQHVER ADFERF