| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1997 |
|---|
| Symbol | |
|---|
| ID | 1169751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 2096495 |
|---|
| End bp | 2098381 |
|---|
| Gene Length | 1887 bp |
|---|
| Protein Length | 628 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637343874 |
|---|
| Product | M1 family peptidase |
|---|
| Protein accession | NP_717604 |
|---|
| Protein GI | 24373561 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGC CATTCGTTCA ATATGCCAAC GCCGCCGATA GTTTACCTAA CAGTAATCTT
GCCAGCGTCG CCACGAGCCC ATTGCACTCA GTCGCAGATA ACCTGACTTT TGCAAATTAC
CAACAGGTAA GCATTCACCA TATTGAACTG GCGCTGAACG TGGATTTTGA GCTGCAACAA
CTCTCGGGTA ACGTCATTCT CGAGCTGGAT TGGCATAAGG CAGGCAAAAC CCTAGTGTTA
GATACTCGCG ATCTCACGAT TAACAGTGTG AGCATGTTAA ATGCAAAAGG CCAATGGCAA
GCCGTGCCCT TTCGTCTCGG CGTTGTCGAT AAGGTCAAAG GCGCGGCGCT TACCATCCAA
TTTCCTCAAG AACGGGTCGC CAAGGTAAAA ATAAATTATC ATACATCGGC CAATCCATCA
GGTATTCAAT GGCTTACTCC AGAGCAAACC CAAGGTAAGC AATGGCCATT TATGTTTAGC
CAGAGCCAAG CTATCCACGC CAGAAGCTGG ATCCCGCTGC AAGATACACC TGCAGTGCGA
CAAACCTACA GCGCCACTGT TACCACCAAG CAAGGCATGA GTGTCGTGAT GAGTGCCGAC
CGGACAAGTC TGTCCGATAC ACAAACCCAA TTCACCATGC CGCAGGCGAT TCCAGCCTAT
TTGATTGCCA TTGCTGCTGG CCACTTACAA TTTGCCGCCT TAGATAAGAC CTCTGGCATT
TGGGCTGAGC CCGAAATGCT CGCCAAGGCC AGCAAAGAGT TTACCGATAC GCCAGCGATG
ATCGCCATCG CCGCCAAACG TTATGGTGAT TATCGCTGGG GTCGTTACGA TCTGTTGATC
CTGCCACCTA GCTTCCCCTT CGGCGGCATG GAAAACCCTC GTTTGTCTTT TATCACCCCC
ACCGTTATTG CGGGAGATAA AAGTTTGGTA AGTTTAATCG CCCATGAACT GGCCCACTCT
TGGTCTGGCA ATTTGGTCAC TAACGCGACT TGGCGTGACC TCTGGCTCAA CGAGGGTTTT
ACCACCTATG TTGAAAATCG GATTATGGAA GATCTCTATG GCCGCGACCG TGCATTGATG
GAGCAAACCA TTAGTTACTC AGAGCTGCTG GCAGAATTAG CCGAGTTGCC CGCAGGCGAC
AGCGTACTGC ATATTGACTT AGGTGAGCGC GATCCCGACG ATGCCTTTAG CGGCGTGCCC
TATGTCAAAG GCCAATTATT CCTGCGCTTC CTTGAACAAA AATTTGGCCG TGAACGCTTC
GATAACTTTG TCAAAAGTTA CTTTGATCAC TTTGCGTTTC AGAGTATTAC CACGGAGCAA
TTCCGCAACT ATCTCACGCA ACATTTACTA CAACGCTATC CCAATATCGT CAGTGAATCC
GAGGTTGATA CATGGATTGA GGGACAAGGT TTACCGCCAT TTTTAACACC GCCCAATTCA
CCCGCCTTCG ATGATATTGA CGCCCAGCGC CAAGCTTGGT TGGATGGCAA AGCAAAGGCT
AGCGCACTCA ACACCCAAGG TTGGACTGTG CATCAATGGC TGCGATTCAT TAACGAAATG
CCACGGTTAA ATCTGACACC TGCACAACTT TTGGAACTCG ATAACGCCTT TCATTTTACC
GGCACCAGCA ACAACGAAAT CGCCTTTGCT TGGTATTCCC TCGCCCTCGA CAATCGCTAT
TTCAGCGTGT TACCTGCATT AAAGCAGCAT TTAACCGAAA TAGGCCGGCG CAGGCTGATT
GTGCCCTTGT ACCAAAAACT GGCGAGCAGC GAACATTACG ACTGGGCAAA AACAGTCTAC
CTTGCAGCGC GCAGCGGCTA CCATCCACAG ACTCAAGCCA GTTTAGATAC GATGTTTAGC
GATACTCCCA TTGAGCATCA GCATTAA
|
|---|
| Protein sequence | MLLPFVQYAN AADSLPNSNL ASVATSPLHS VADNLTFANY QQVSIHHIEL ALNVDFELQQ
LSGNVILELD WHKAGKTLVL DTRDLTINSV SMLNAKGQWQ AVPFRLGVVD KVKGAALTIQ
FPQERVAKVK INYHTSANPS GIQWLTPEQT QGKQWPFMFS QSQAIHARSW IPLQDTPAVR
QTYSATVTTK QGMSVVMSAD RTSLSDTQTQ FTMPQAIPAY LIAIAAGHLQ FAALDKTSGI
WAEPEMLAKA SKEFTDTPAM IAIAAKRYGD YRWGRYDLLI LPPSFPFGGM ENPRLSFITP
TVIAGDKSLV SLIAHELAHS WSGNLVTNAT WRDLWLNEGF TTYVENRIME DLYGRDRALM
EQTISYSELL AELAELPAGD SVLHIDLGER DPDDAFSGVP YVKGQLFLRF LEQKFGRERF
DNFVKSYFDH FAFQSITTEQ FRNYLTQHLL QRYPNIVSES EVDTWIEGQG LPPFLTPPNS
PAFDDIDAQR QAWLDGKAKA SALNTQGWTV HQWLRFINEM PRLNLTPAQL LELDNAFHFT
GTSNNEIAFA WYSLALDNRY FSVLPALKQH LTEIGRRRLI VPLYQKLASS EHYDWAKTVY
LAARSGYHPQ TQASLDTMFS DTPIEHQH
|
|---|
| |