| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1959 |
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| Symbol | |
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| ID | 1169719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 2065014 |
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| End bp | 2065925 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343842 |
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| Product | ABC transporter, periplasmic substrate-binding protein, putative |
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| Protein accession | NP_717566 |
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| Protein GI | 24373523 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAA TCGATGATCT TCAACAAAAA CAATTATGTA ATGGACAACA TGCCCATCAT
CACGCACCGC TAATTCGTTT AGGTGTAACG GACTTAAGCT TTCATCGCGT GACTGCGGCT
GTGGTTGCCC AGGTAATGCA CTTGATGGGC AAAAGGGTCG AGCTAAGTTA TGCCCTGCAT
GAGGCAAATT TTAATCGGCT CAAGCTTGGG CAGATAGATT TGCTTTGCTC GGCTTGGCTG
CCTCACAGTC ATGGCGTGTA TCGGCAGGAG GTTGAGACCC AAGTCACAAC GCGTGAGCTA
GGGCTACATT ATGAGCCTTA TGCACTTTGG GGTGTACCAG ATTATGTGCC TGAAGATGCG
GTTTCACGCA TTGAAGACTT GCTTAAACCT GAGGTGAAAC AACGGATGCG GCCGATTATT
CAAGGTATTG GTGAAGGGGC GGGTATCACC CGTTTTTCTA AAAATATCAT GGAGCAATAT
GGATTAACTG CGGCAGGTTA TCAATTTAGA ACGGGCACTC AGGCCGATTG TGTGGCGGCA
TTTGAATCGG CGGTGTCAGT ACGGGACTGG GTAATTGTGC CATTGTGGCA TCCGCAATTT
TTACACCATC AATACGGTAT TCGTGATCTT CAAGACCCCA AAGGTTTACT TGGGGGAAAA
GATAAAGCGG TTTTGCTCGC CCGTGAACGC GAGTTAGCAA TTAATTTCTC GCCGGAACAA
ATTCAAGTAC TTGATAACAT AGTGTTATCG AATCAAATTG TTGCAGAACT CGATTATGCG
GTTAATCGAC AAGGAATGAC GGAAGATGAG GCCGCTGCGA ACTGGTTGGC AGTCAATCCT
TCGCATTTGA CGACGTGGTT AGCCCCGCTG CTTAATCCTA CGAATGTCAC ATCTCAGGAG
GTGACATTAT GA
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| Protein sequence | MNLIDDLQQK QLCNGQHAHH HAPLIRLGVT DLSFHRVTAA VVAQVMHLMG KRVELSYALH
EANFNRLKLG QIDLLCSAWL PHSHGVYRQE VETQVTTREL GLHYEPYALW GVPDYVPEDA
VSRIEDLLKP EVKQRMRPII QGIGEGAGIT RFSKNIMEQY GLTAAGYQFR TGTQADCVAA
FESAVSVRDW VIVPLWHPQF LHHQYGIRDL QDPKGLLGGK DKAVLLARER ELAINFSPEQ
IQVLDNIVLS NQIVAELDYA VNRQGMTEDE AAANWLAVNP SHLTTWLAPL LNPTNVTSQE
VTL
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