| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1923 |
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| Symbol | |
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| ID | 1169684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2021479 |
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| End bp | 2024541 |
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| Gene Length | 3063 bp |
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| Protein Length | 1020 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343807 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | NP_717530 |
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| Protein GI | 24373487 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTCA CTCGTTTAGC GATAAAACTC CCTGTCACCA CCAGCATGTT TTTCTTTGCT
ATCTTGCTGT TTGGTCTGGC ATCTAGCCGC CTGTTGCCAC TAGAAATGTT CCCTGGTATC
GATATTCCGC AGATTGTAGT GCAAGTGCCT TACAAAGGCT CTACACCCGC GGAGGTCGAA
CGCGATATTA CTAAGGTACT CGAAGAGTCA CTCGCCACCA TGGGCGGTAT TGATGAGCTC
GAATCTGAGT CTTCTCAAGA AGGTGCAGAG ATCGAAATCA ATATGAAATG GGGCGAAAAC
GTTGCGACGA AAAGTTTAGA AGCGCGGGAA AAAATCGACG CGGTACGGCA TTTATTACCA
AGGGATGTTG AACGGGTATT TATCCGCCAA TTTTCTACGG CCGATATGCC CGTTTTGACC
ATACGCATTT CGAGCGACCG CGAGCTTTCT GGGGCATTCG ATTTGCTCGA TAAACAGTTA
AAACGGCCAT TGGAGCGGGT CGAAGGCGTC TCTAAGGTGA GCCTCTATGG TGTAGAGCAA
AAACAGATAG AGGTGCGGAT CAATGCCAAC CGTTTGGCTG CAAGTGGTTT TTCAGCAACG
GAATTACAAG CTCGTCTCGC CCGCGAAAAC TTTGTATTAA GTGCTGGAAC CTTAAGGGAA
AGCAACTTAG TTTATCAAGT TTCACCTAAG GGCGAGTTTA GAAATCTTGA AGATATAAAG
GCATTAGTAT TAGTTCCAGG CTTAACCTTA GGCGATGTGG CTGATGTGCA GTTTTCCCTG
CCTGAGCGTA GCGAAGGACG TCATCTAGAC CAACACTATG CTGTGGGTCT GGATGTGTTT
AAGGAGTCTG GTGCAAACTT GGTGGAAGTG TCTGATCGTG TGCTTAAGGT GATTGAACAG
GCCAAACAAG ACCAACAATT TCAAGGTATT CGCTTGTTTA TTATGGAAGA TCAAGCATCC
GGAGTGAAGT CTTCCCTAAC GGATCTACTG CTTTCTGGAT TAGTGGGCGC CCTGTTATCA
TTTATCATAC TGTATCTATT TCTTAGAAAT TTCAAAATGA CCATGATTGT GGTGTCATCA
GTACCGATTT CCATCGGTAT GACATTGGCC GCCATGTATC TGCTCGGTTA CAGCTTAAAT
ATTCTGTCGA TGATGGGCTT ACTGCTGGCT GTGGGTATGC TCATCGATAA CGCGGTAGTG
GTCACCGAAA GTGTACTACA AGAAAAACAA GGTAACTCTG TCAATTCGAA TCCCCAAGAC
AATGAAAACG CTGTAATGAC AGGAGTCGAT AAGGTGAGTC TTGCAGTGCT TGCGGGCACC
TTGACCACGG CGATTGTGTT TTTACCCAAT ATTTTTGGCG TCAAAGTCCA ACTCACCATT
TTCCTTGAGC ATGTGGCGAT TGCGATTTGT ATTTCGCTGG CTGCATCACT GTTGGTCGCT
AAAACATTAA TTCCATTAAT GTTAACCAAG TTCCACTTCG ATATTGAGCC AGATAATACC
ACCGGTAAAT TGCAAAATTT CTACAATCGT AGTCTCAATT GGGTACTTAT CAGACCTTGG
CGTTCAGGGC TGATTTCAAT AGCGATCCTT GCTTCAACTG CCCTGCCGAT ATCGATGGTG
AAACAGGATC AGGAAGATAG CCAAAGTAAG GAGCGGATTT ACATCAACTA TCAAGTTGAA
GGTCGCCATA ATCTCAATGT GACAGAAGCA ATGGTAAATC AAATGGAAGA TTATCTTTAT
AAGAATAAAG AGCAATTCCA TATTGATACT GTGTATAGCT ACTATGCCCC TGACGATGCT
TCATCGGTGA TCTTGCTGAA AAAAGACCTG CCCATGCCGC TTGATGAACT GAAGCAAAAG
ATTCGCAGTG GCTTTCCTAA GTACTCCATC GCCAAACCCC AATTCGGCTG GGGTGACGAT
AACTCGGGCG TACGCGTCAC GCTCACTGGA CGCTCAACCT CCGAACTTAT ACATTTGAGT
GAACAAGTAT TACCACTACT AAAGAATATC AAAGGGTTAG TGGATGTACG ATCTGAAGTC
AATGGCGCTC AGCAGGAAGT GGTGATCCGC ATTAATAGGC AAATGGCGGC AAGGTTGGAT
TTAAAACTGA ACGAAGTGGC TTCCAGCATT TCAATGGCAC TAAGAGGAAC ACCACTGCGC
TCATTTAGGC ACGACCCGAG CGGGGAACTG CGTATCGAAA TGGCCTATGA GAAGGAATGG
CAAAAATCCC TCGATAAGCT TAAGCAATTG CCGGTAGTGC GAATCGATCA GCGCCTTTAT
ACGCTTGATA ATCTTGCTAG TATCGAAATC CAACCCAGAT TCGATACCAT TAAGCACTAT
AATCGTCAGA CCTCGCTCTC TATCGGAGCA AACCTAGATA ATCTCACCAC GGAAGAAGCG
CAAACGAAAA TAAAGCAAGT CATGGAAAAT GTTAGCTTTC CTGATGGTTA CAACTATTCA
CTTCGGGGCG GTTTTGAGCG ACAAGAAGAA GATCAGAGCA TCATGGTCAT CAATATGCTG
CTTGCCATTG CCATGATTTA TATTGTAATG GCGGCATTAT TCGAGTCCTT GTTATTACCC
ACAGCGATTA TTACCTCAAT CCTGTTCTCT ATTACAGGTG TCTTTTGGGC GTTACTGCTC
ACAGGCACGC CTATGTCAGT CATGGCGATG ATCGGTATCC TGATTTTAAT GGGGGTTGTG
GTGAATAACG GTATCGTCTT GGTCGATCAA ATCAACCAAA TGACGCCCGA ACTCGATAAG
CTTTCGGACA CCATTCGCGA AGTGTGTATT ACCCGTTTGC GTCCGGTGTT AATGACGGTT
GGAACCACGG TTCTGGGCCT TGTACCATTG GCCATGGACG ATACCCAAAT TGGTGGCGGC
GGCCCGCCCT ACTATCCGAT GGCGATAGCG ATTATCGGCG GTTTGTCTTT CTCAACCTTG
ACGAGCCTAT ATTTGGTGCC GTTATGTTAT CAGCTGCTTT ATAGAATGCG TTACCGCGCC
GTGTTACAAC TGGGTGAATC GCATCGCTTC GCCCAAAAAC TGTTACCCTG GACGGCCAGA
TAA
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| Protein sequence | MNLTRLAIKL PVTTSMFFFA ILLFGLASSR LLPLEMFPGI DIPQIVVQVP YKGSTPAEVE
RDITKVLEES LATMGGIDEL ESESSQEGAE IEINMKWGEN VATKSLEARE KIDAVRHLLP
RDVERVFIRQ FSTADMPVLT IRISSDRELS GAFDLLDKQL KRPLERVEGV SKVSLYGVEQ
KQIEVRINAN RLAASGFSAT ELQARLAREN FVLSAGTLRE SNLVYQVSPK GEFRNLEDIK
ALVLVPGLTL GDVADVQFSL PERSEGRHLD QHYAVGLDVF KESGANLVEV SDRVLKVIEQ
AKQDQQFQGI RLFIMEDQAS GVKSSLTDLL LSGLVGALLS FIILYLFLRN FKMTMIVVSS
VPISIGMTLA AMYLLGYSLN ILSMMGLLLA VGMLIDNAVV VTESVLQEKQ GNSVNSNPQD
NENAVMTGVD KVSLAVLAGT LTTAIVFLPN IFGVKVQLTI FLEHVAIAIC ISLAASLLVA
KTLIPLMLTK FHFDIEPDNT TGKLQNFYNR SLNWVLIRPW RSGLISIAIL ASTALPISMV
KQDQEDSQSK ERIYINYQVE GRHNLNVTEA MVNQMEDYLY KNKEQFHIDT VYSYYAPDDA
SSVILLKKDL PMPLDELKQK IRSGFPKYSI AKPQFGWGDD NSGVRVTLTG RSTSELIHLS
EQVLPLLKNI KGLVDVRSEV NGAQQEVVIR INRQMAARLD LKLNEVASSI SMALRGTPLR
SFRHDPSGEL RIEMAYEKEW QKSLDKLKQL PVVRIDQRLY TLDNLASIEI QPRFDTIKHY
NRQTSLSIGA NLDNLTTEEA QTKIKQVMEN VSFPDGYNYS LRGGFERQEE DQSIMVINML
LAIAMIYIVM AALFESLLLP TAIITSILFS ITGVFWALLL TGTPMSVMAM IGILILMGVV
VNNGIVLVDQ INQMTPELDK LSDTIREVCI TRLRPVLMTV GTTVLGLVPL AMDDTQIGGG
GPPYYPMAIA IIGGLSFSTL TSLYLVPLCY QLLYRMRYRA VLQLGESHRF AQKLLPWTAR
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